RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 MANBALQ9NQG1 85 aa2.4□□□□□ -2.03
VPS8-217ENST00000465213 ARHGAP32A7KAX9 2087 aa2.4□□□□□ -2.03
VPS8-217ENST00000465213 MAP1BP46821 2468 aaKnown RBP2.4□□□□□ -2.03
VPS8-217ENST00000465213 NWD2Q9ULI1 1742 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 DCHS1Q96JQ0 3298 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 MROH1Q8NDA8 1641 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 LTN1O94822 1766 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 ABCA10Q8WWZ4 1543 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 NUPR2A6NF83 97 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 H3BUT2 72 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
VPS8-217ENST00000465213 UBE2D1P51668 147 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 MOBPQ13875 183 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 SPATA45Q537H7 98 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 LINC00643Q86TS7 51 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 Q8N6K4 173 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 PATE1Q8WXA2 126 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 CYSTM1Q9H1C7 97 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 COL11A1P12107 1806 aaPredicted RBP2.39□□□□□ -2.03
VPS8-217ENST00000465213 PATJQ8NI35 1801 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 ADGRB2O60241 1585 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 TRPM7Q96QT4 1865 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 TANC1Q9C0D5 1861 aa2.39□□□□□ -2.03
VPS8-217ENST00000465213 MUC22E2RYF6 1773 aaPredicted RBP2.38□□□□□ -2.03
VPS8-217ENST00000465213 PRUNE2Q8WUY3 3088 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 EFCAB5A4FU69 1503 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 DUOX2Q9NRD8 1548 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 NUP188Q5SRE5 1749 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 C10orf128Q5T292 105 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 NINQ8N4C6 2090 aa2.38□□□□□ -2.03
VPS8-217ENST00000465213 ZNF142P52746 1687 aaPredicted RBP2.37□□□□□ -2.03
VPS8-217ENST00000465213 RGPD1P0DJD0 1748 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 DIP2CQ9Y2E4 1556 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 POLQO75417 2590 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 SCN11AQ9UI33 1791 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 IGHV3-30P01768 117 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 IGHV3-30-5P0DP03 117 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
VPS8-217ENST00000465213 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 CFAP126Q5VTH2 177 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 Q5VV11 94 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 CSAG1Q6PB30 78 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 MRPL36Q9P0J6 103 aaKnown RBP2.37□□□□□ -2.03
VPS8-217ENST00000465213 PTPRZ1P23471 2315 aaPredicted RBP2.37□□□□□ -2.03
VPS8-217ENST00000465213 RREB1Q92766 1687 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 NOTCH1P46531 2555 aa2.37□□□□□ -2.03
VPS8-217ENST00000465213 KIAA0100Q14667 2235 aaKnown RBP2.37□□□□□ -2.03
VPS8-217ENST00000465213 CASP8AP2Q9UKL3 1982 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 CELSR3Q9NYQ7 3312 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 USP32Q8NFA0 1604 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 A0A0G2JND7 137 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 LOC285095A0A1B0GVY8 99 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 EDDM3BP56851 147 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 LINC00315P59091 139 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 XAF1Q6GPH4 301 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 SPEGQ15772 3267 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 ZMYM4Q5VZL5 1548 aa2.36□□□□□ -2.03
VPS8-217ENST00000465213 LTBP2Q14767 1821 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 IQGAP3Q86VI3 1631 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 PIEZO2Q9H5I5 2752 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 COL4A5P29400 1685 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 USP34Q70CQ2 3546 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 KNDC1Q76NI1 1749 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 HTTP42858 3142 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 A0A087WWC5 75 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 SDHAF1A6NFY7 115 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 HIGD1CA8MV81 97 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 TMEM14DPA8MWL7 114 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 EFNA4P52798 201 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 ZNF56Q15929 161 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 TVP23CQ96ET8 276 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 DYNLRB1Q9NP97 96 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 CDC42SE2Q9NRR3 84 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 LENEPQ9Y5L5 61 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 PLXNA1Q9UIW2 1896 aa2.35□□□□□ -2.03
VPS8-217ENST00000465213 MYH4Q9Y623 1939 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 CROCC2H7BZ55 1655 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 IGKV3-7A0A075B6H7 116 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 CHKB-CPT1BH3BT56 60 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 TFF1P04155 84 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 NUMA1Q14980 2115 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 Q86TA4 180 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 NCOR1O75376 2440 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 SPG11Q96JI7 2443 aa2.34□□□□□ -2.03
VPS8-217ENST00000465213 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.04
VPS8-217ENST00000465213 MYO18AQ92614 2054 aaKnown RBP2.33□□□□□ -2.04
VPS8-217ENST00000465213 SPTA1P02549 2419 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 PREX2Q70Z35 1606 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 A0A0G2JQZ4 141 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 LOC101927531A0A1B0GV80 90 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms