RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PYY3Q5JQD4 70 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 SPAG11AQ6PDA7 123 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 BAGE3Q86Y29 109 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 R4GMQ9 66 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 V9GYH0 126 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 AFDNP55196 1824 aaKnown RBP0.63□□□□□ -2.31
CLK1-208ENST00000464454 NWD2Q9ULI1 1742 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 ANKRD26Q9UPS8 1709 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 EPRSP07814 1512 aaKnown RBP0.63□□□□□ -2.31
CLK1-208ENST00000464454 TOPAZ1Q8N9V7 1692 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 SSC5DA1L4H1 1573 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 MAP2P11137 1827 aaKnown RBP0.62□□□□□ -2.31
CLK1-208ENST00000464454 MARF1Q9Y4F3 1742 aaKnown RBP0.62□□□□□ -2.31
CLK1-208ENST00000464454 TRGV1A0A0A0MS02 117 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 IGLC7A0M8Q6 106 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 G3V318 75 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 M0R135 149 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 FXYD1O00168 92 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 PPP1R17O96001 155 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 GYPAP02724 150 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 SEC11AP67812 179 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 LCN9Q8WX39 176 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 VAMP8Q9BV40 100 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 CACFD1Q9UGQ2 172 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 CC2D2AQ9P2K1 1620 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 NAV3Q8IVL0 2385 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 ARHGEF5Q12774 1597 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 LAMC3Q9Y6N6 1575 aa0.62□□□□□ -2.31
CLK1-208ENST00000464454 PLEKHH2Q8IVE3 1493 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 SHANK2Q9UPX8 1470 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 EHBP1L1Q8N3D4 1523 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 F8VRH5 84 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 CHKB-CPT1BH3BT56 60 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 LY6G6CO95867 125 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 COX6CP09669 75 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 SMIM11BQ8TCY0 68 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 PROK2Q9HC23 129 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 LINC00846Q9NV44 126 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 PLAC8Q9NZF1 115 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 MYH8P13535 1937 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 CEP162Q5TB80 1403 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 MED13LQ71F56 2210 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 CHD1O14646 1710 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 KIAA1551Q9HCM1 1747 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 FANCAO15360 1455 aa0.61□□□□□ -2.31
CLK1-208ENST00000464454 APCP25054 2843 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 DOCK11Q5JSL3 2073 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 TET3O43151 1660 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 TRBV25-1A0A075B6N4 114 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 UQCR11O14957 56 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
CLK1-208ENST00000464454 Q6ZRX8 168 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 PMCHL2Q9BQD1 86 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 C20orf78Q9BR46 151 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 UQCR10Q9UDW1 63 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 MLH3Q9UHC1 1453 aa0.6□□□□□ -2.31
CLK1-208ENST00000464454 ABCC3O15438 1527 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 KCPQ6ZWJ8 1503 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 TANC1Q9C0D5 1861 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 PRDM2Q13029 1718 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 ABCA3Q99758 1704 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 SYS1-DBNDD2H3BUS1 97 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 PIN1P1O15428 100 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 TMEM170BQ5T4T1 132 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 BAGE2Q86Y30 109 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 NXT2Q9NPJ8 142 aaKnown RBP0.59□□□□□ -2.31
CLK1-208ENST00000464454 FAIMQ9NVQ4 179 aa0.59□□□□□ -2.31
CLK1-208ENST00000464454 ARHGAP35Q9NRY4 1499 aa0.59□□□□□ -2.32
CLK1-208ENST00000464454 NRXN1Q9ULB1 1477 aa0.59□□□□□ -2.32
CLK1-208ENST00000464454 PARP14Q460N5 1801 aa0.59□□□□□ -2.32
CLK1-208ENST00000464454 ARHGEF12Q9NZN5 1544 aa0.59□□□□□ -2.32
CLK1-208ENST00000464454 PLIN4Q96Q06 1357 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 UNC13BO14795 1591 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 PI4KAP42356 2102 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 A0A0G2JND7 137 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 CRYM-AS1A6NIL9 109 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 K7EP34 96 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 APOC3P02656 99 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 SPINK7P58062 85 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 TDRG1Q3Y452 100 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 SMIM4Q8WVI0 70 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 MANBALQ9NQG1 85 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 RABAC1Q9UI14 185 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 SBF2Q86WG5 1849 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 ABCA1O95477 2261 aa0.58□□□□□ -2.32
CLK1-208ENST00000464454 AKAP12Q02952 1782 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 ATP10BO94823 1461 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 TRAV1-2A0A0B4J238 106 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 ACYP2P14621 99 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 COX17Q14061 63 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 HMGN3Q15651 99 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 TMEM263Q8WUH6 116 aaKnown RBP0.57□□□□□ -2.32
CLK1-208ENST00000464454 Q9H521 79 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 LOC285556D6RIA3 1793 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 ARFGEF1Q9Y6D6 1849 aa0.57□□□□□ -2.32
CLK1-208ENST00000464454 RAPGEF6Q8TEU7 1601 aa0.56□□□□□ -2.32
CLK1-208ENST00000464454 POLA1P09884 1462 aaPredicted RBP0.56□□□□□ -2.32
CLK1-208ENST00000464454 FAM223BA6NKX1 122 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms