RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 C9orf66Q5T8R8 295 aa14.6□□□□□ -0.07
SDHAF3-202ENST00000432641 A0A0J9YY99 117 aa14.59□□□□□ -0.07
SDHAF3-202ENST00000432641 SRSF9Q13242 221 aaKnown RBP eCLIP14.59□□□□□ -0.07
SDHAF3-202ENST00000432641 IGHV3-38A0A0C4DH36 116 aa14.59□□□□□ -0.07
SDHAF3-202ENST00000432641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.58□□□□□ -0.08
SDHAF3-202ENST00000432641 IGKV2-29A2NJV5 120 aaPredicted RBP14.58□□□□□ -0.08
SDHAF3-202ENST00000432641 TRGV2A0A075B6R0 118 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 TSPEAR-AS2P59090 65 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 UBE2D3P61077 147 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 UBE2D2P62837 147 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 TRBV6-4A0A1B0GX49 114 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 CKS1BP61024 79 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 SLC25A29Q8N8R3 303 aa14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 CSDC2Q9Y534 153 aaKnown RBP14.57□□□□□ -0.08
SDHAF3-202ENST00000432641 DGAT2L7PQ6IED9 249 aa14.56□□□□□ -0.08
SDHAF3-202ENST00000432641 SETD2Q9BYW2 2564 aaPredicted RBP14.56□□□□□ -0.08
SDHAF3-202ENST00000432641 CRLF1O75462 422 aa14.56□□□□□ -0.08
SDHAF3-202ENST00000432641 FOXI1Q12951 378 aa14.56□□□□□ -0.08
SDHAF3-202ENST00000432641 CEMP1Q6PRD7 247 aaPredicted RBP14.56□□□□□ -0.08
SDHAF3-202ENST00000432641 GAGE7O76087 117 aa14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 GAGE12FP0CL80 117 aa14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 GAGE12GP0CL81 117 aa14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 GAGE12IP0CL82 117 aa14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 Q6ZUT4 128 aa14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 SETXQ7Z333 2677 aaKnown RBP14.54□□□□□ -0.08
SDHAF3-202ENST00000432641 APOMO95445 188 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 TIRAPP58753 221 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 HECTD1Q9ULT8 2610 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 IGHV1-58A0A0C4DH39 117 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 SMIM9A6NGZ8 99 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 SMCPP49901 116 aaPredicted RBP14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 UBE2D1P51668 147 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 MTURNQ8N3F0 131 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 CDIP1Q9H305 208 aa14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 GEMIN7Q9H840 131 aaKnown RBP14.53□□□□□ -0.08
SDHAF3-202ENST00000432641 H7C423 109 aa14.52□□□□□ -0.09
SDHAF3-202ENST00000432641 KIR2DL5BQ8NHK3 375 aa14.52□□□□□ -0.09
SDHAF3-202ENST00000432641 IGHV3-30-3P0DP02 117 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 TRGV4A0A0C4DH28 118 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 GAGE12JA6NER3 117 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 GAGE4Q13068 117 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 GAGE5Q13069 117 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 FAM19A3Q7Z5A8 133 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 CITED1Q99966 193 aa14.51□□□□□ -0.09
SDHAF3-202ENST00000432641 IGLV5-45A0A087WSX0 123 aa14.5□□□□□ -0.09
SDHAF3-202ENST00000432641 SBSPONQ8IVN8 264 aa14.5□□□□□ -0.09
SDHAF3-202ENST00000432641 PGPEP1Q9NXJ5 209 aa14.5□□□□□ -0.09
SDHAF3-202ENST00000432641 IGHV3-30P01768 117 aa14.5□□□□□ -0.09
SDHAF3-202ENST00000432641 IGHV3-30-5P0DP03 117 aa14.5□□□□□ -0.09
SDHAF3-202ENST00000432641 RNASE13Q5GAN3 156 aaKnown RBP14.49□□□□□ -0.09
SDHAF3-202ENST00000432641 HERVK_113P63121 156 aa14.48□□□□□ -0.09
SDHAF3-202ENST00000432641 NTM-AS1Q6ZSK4 140 aa14.48□□□□□ -0.09
SDHAF3-202ENST00000432641 LINC00612Q8N6U2 182 aa14.48□□□□□ -0.09
SDHAF3-202ENST00000432641 VSIG2Q96IQ7 327 aa14.48□□□□□ -0.09
SDHAF3-202ENST00000432641 TMEM243Q9BU79 118 aa14.48□□□□□ -0.09
SDHAF3-202ENST00000432641 OTOGQ6ZRI0 2925 aa14.47□□□□□ -0.09
SDHAF3-202ENST00000432641 IGHV3-64A0A075B6Q5 118 aa14.46□□□□□ -0.09
SDHAF3-202ENST00000432641 UBE2L6O14933 153 aa14.46□□□□□ -0.09
SDHAF3-202ENST00000432641 FHL2Q14192 279 aa14.46□□□□□ -0.09
SDHAF3-202ENST00000432641 LYRM7Q5U5X0 104 aa14.46□□□□□ -0.09
SDHAF3-202ENST00000432641 TMEM101Q96IK0 257 aa14.46□□□□□ -0.09
SDHAF3-202ENST00000432641 TSPAN13O95857 204 aa14.45□□□□□ -0.1
SDHAF3-202ENST00000432641 TRAV26-1A0A087WT03 109 aa14.45□□□□□ -0.1
SDHAF3-202ENST00000432641 A0A0J9YXY3 114 aa14.45□□□□□ -0.1
SDHAF3-202ENST00000432641 JMJD1CQ15652 2540 aa14.44□□□□□ -0.1
SDHAF3-202ENST00000432641 C10orf126Q8N4M7 172 aa14.44□□□□□ -0.1
SDHAF3-202ENST00000432641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.44□□□□□ -0.1
SDHAF3-202ENST00000432641 PPDPFLQ8WWR9 84 aa14.44□□□□□ -0.1
SDHAF3-202ENST00000432641 NSD1Q96L73 2696 aaPredicted RBP14.44□□□□□ -0.1
SDHAF3-202ENST00000432641 LINC00694P0DN24 101 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 APOC4P55056 127 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 ZFAND6Q6FIF0 208 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 CDC42SE2Q9NRR3 84 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 NDUFA12Q9UI09 145 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 SPINK8P0C7L1 97 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 X6R8D5 127 aa14.43□□□□□ -0.1
SDHAF3-202ENST00000432641 NOTCH2Q04721 2471 aa14.42□□□□□ -0.1
SDHAF3-202ENST00000432641 TRAV8-3A0A0A6YYJ7 113 aa14.42□□□□□ -0.1
SDHAF3-202ENST00000432641 TEN1Q86WV5 123 aa14.42□□□□□ -0.1
SDHAF3-202ENST00000432641 CARD19Q96LW7 228 aa14.42□□□□□ -0.1
SDHAF3-202ENST00000432641 CDKN2A-AS1Q9UH64 79 aa14.42□□□□□ -0.1
SDHAF3-202ENST00000432641 TRBV20-1A0A075B6N2 111 aa14.41□□□□□ -0.1
SDHAF3-202ENST00000432641 PSMB2P49721 201 aa14.41□□□□□ -0.1
SDHAF3-202ENST00000432641 LINC00242Q5T6M2 205 aa14.41□□□□□ -0.1
SDHAF3-202ENST00000432641 LYRM9A8MSI8 78 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 TIMM17BO60830 172 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 MT-ATP8P03928 68 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 WFDC9Q8NEX5 89 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 WIPF1O43516 503 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 SPANXDQ9BXN6 97 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 SPANXCQ9NY87 97 aa14.4□□□□□ -0.1
SDHAF3-202ENST00000432641 FN1P02751 2386 aaKnown RBP14.39□□□□□ -0.11
SDHAF3-202ENST00000432641 XGP55808 180 aa14.39□□□□□ -0.11
SDHAF3-202ENST00000432641 TRBV6-8A0A0A6YYG3 113 aa14.38□□□□□ -0.11
SDHAF3-202ENST00000432641 IGLV5-39A0A0G2JS06 123 aa14.38□□□□□ -0.11
SDHAF3-202ENST00000432641 CFC1BP0CG36 223 aa14.38□□□□□ -0.11
SDHAF3-202ENST00000432641 CFC1P0CG37 223 aa14.38□□□□□ -0.11
SDHAF3-202ENST00000432641 A0A0B4J2C4 111 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms