RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 CITED1Q99966 193 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 WFDC10AQ9H1F0 79 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGLL5B9A064 214 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 WIPF1O43516 503 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 APOC4P55056 127 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
HLA-DPA1-242ENST00000419277 OTOGQ6ZRI0 2925 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 UBE2L6O14933 153 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TIMM17BO60830 172 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 GAGE7O76087 117 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 GAGE12FP0CL80 117 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 GAGE12GP0CL81 117 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 GAGE12IP0CL82 117 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 RNF183Q96D59 192 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 Q9UF83 564 aa10.36□□□□□ -0.75
HLA-DPA1-242ENST00000419277 JMJD1CQ15652 2540 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 C2CD3Q4AC94 2353 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 CUBNO60494 3623 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 K7ERJ3 54 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 K7ERU9 68 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
HLA-DPA1-242ENST00000419277 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
HLA-DPA1-242ENST00000419277 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 SPANXCQ9NY87 97 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 GAGE4Q13068 117 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 GAGE5Q13069 117 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 F8W1H4 67 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 FHL2Q14192 279 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NTM-AS1Q6ZSK4 140 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
HLA-DPA1-242ENST00000419277 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NDUFA1O15239 70 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 IFITM1P13164 125 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
HLA-DPA1-242ENST00000419277 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 X6R8D5 127 aa10.3□□□□□ -0.76
HLA-DPA1-242ENST00000419277 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
HLA-DPA1-242ENST00000419277 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
HLA-DPA1-242ENST00000419277 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
HLA-DPA1-242ENST00000419277 HERV-K104P63124 156 aa10.28□□□□□ -0.76
HLA-DPA1-242ENST00000419277 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NAA38Q9BRA0 125 aaKnown RBP10.28□□□□□ -0.76
HLA-DPA1-242ENST00000419277 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
HLA-DPA1-242ENST00000419277 FN1P02751 2386 aaKnown RBP10.28□□□□□ -0.76
HLA-DPA1-242ENST00000419277 TEX48A0A1B0GUV7 120 aa10.27□□□□□ -0.76
HLA-DPA1-242ENST00000419277 MIFP14174 115 aa10.27□□□□□ -0.76
HLA-DPA1-242ENST00000419277 MIAQ16674 131 aa10.27□□□□□ -0.76
HLA-DPA1-242ENST00000419277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.27□□□□□ -0.76
HLA-DPA1-242ENST00000419277 CBY1Q9Y3M2 126 aa10.27□□□□□ -0.76
HLA-DPA1-242ENST00000419277 NOTCH3Q9UM47 2321 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 SPINK8P0C7L1 97 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 CFC1BP0CG36 223 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 CFC1P0CG37 223 aa10.27□□□□□ -0.77
HLA-DPA1-242ENST00000419277 APOMO95445 188 aa10.26□□□□□ -0.77
HLA-DPA1-242ENST00000419277 TSPAN13O95857 204 aa10.26□□□□□ -0.77
HLA-DPA1-242ENST00000419277 LITAFQ99732 161 aa10.26□□□□□ -0.77
HLA-DPA1-242ENST00000419277 A4D1N5 150 aa10.25□□□□□ -0.77
HLA-DPA1-242ENST00000419277 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 BAHCC1Q9P281 2608 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 NIPBLQ6KC79 2804 aaeCLIP10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 TRAV26-1A0A087WT03 109 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 J3QR89 54 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 SH2D6Q7Z4S9 175 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 ATP6V0E2Q8NHE4 81 aa10.24□□□□□ -0.77
HLA-DPA1-242ENST00000419277 HIVEP1P15822 2718 aa10.23□□□□□ -0.77
HLA-DPA1-242ENST00000419277 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
HLA-DPA1-242ENST00000419277 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
HLA-DPA1-242ENST00000419277 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
HLA-DPA1-242ENST00000419277 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
HLA-DPA1-242ENST00000419277 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
HLA-DPA1-242ENST00000419277 F5H768 121 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms