RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
PIKFYVE-204ENST00000407449 DGAT2L7PQ6IED9 249 aa11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 UBE2D1P51668 147 aa11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 CITED1Q99966 193 aa11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 SPCS1Q9Y6A9 102 aa11.8□□□□□ -0.52
PIKFYVE-204ENST00000407449 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 IGLL5B9A064 214 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 SMAGPQ0VAQ4 97 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 SBSPONQ8IVN8 264 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 SPATA3Q8NHX4 192 aa11.79□□□□□ -0.52
PIKFYVE-204ENST00000407449 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
PIKFYVE-204ENST00000407449 IGHV3-30-3P0DP02 117 aa11.78□□□□□ -0.52
PIKFYVE-204ENST00000407449 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
PIKFYVE-204ENST00000407449 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
PIKFYVE-204ENST00000407449 IGHV1-58A0A0C4DH39 117 aa11.78□□□□□ -0.52
PIKFYVE-204ENST00000407449 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
PIKFYVE-204ENST00000407449 KIR2DL5BQ8NHK3 375 aa11.77□□□□□ -0.53
PIKFYVE-204ENST00000407449 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.53
PIKFYVE-204ENST00000407449 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 TIRAPP58753 221 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 SMIM9A6NGZ8 99 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 FHL2Q14192 279 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 LINC00612Q8N6U2 182 aa11.76□□□□□ -0.53
PIKFYVE-204ENST00000407449 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
PIKFYVE-204ENST00000407449 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
PIKFYVE-204ENST00000407449 TRAV8-3A0A0A6YYJ7 113 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 FAM19A3Q7Z5A8 133 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 X6R8D5 127 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 NOTCH3Q9UM47 2321 aa11.74□□□□□ -0.53
PIKFYVE-204ENST00000407449 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
PIKFYVE-204ENST00000407449 A0A0J9YXY3 114 aa11.73□□□□□ -0.53
PIKFYVE-204ENST00000407449 H7C423 109 aa11.73□□□□□ -0.53
PIKFYVE-204ENST00000407449 SPINK8P0C7L1 97 aa11.73□□□□□ -0.53
PIKFYVE-204ENST00000407449 HERVK_113P63121 156 aa11.73□□□□□ -0.53
PIKFYVE-204ENST00000407449 UBE2L6O14933 153 aa11.72□□□□□ -0.53
PIKFYVE-204ENST00000407449 CDKN2A-AS1Q9UH64 79 aa11.72□□□□□ -0.53
PIKFYVE-204ENST00000407449 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
PIKFYVE-204ENST00000407449 DEFB130BP0DP73 79 aa11.71□□□□□ -0.53
PIKFYVE-204ENST00000407449 DEFB130AP0DP74 79 aa11.71□□□□□ -0.53
PIKFYVE-204ENST00000407449 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
PIKFYVE-204ENST00000407449 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
PIKFYVE-204ENST00000407449 NDUFA12Q9UI09 145 aa11.71□□□□□ -0.53
PIKFYVE-204ENST00000407449 APOC4P55056 127 aa11.7□□□□□ -0.54
PIKFYVE-204ENST00000407449 ZFAND6Q6FIF0 208 aa11.7□□□□□ -0.54
PIKFYVE-204ENST00000407449 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
PIKFYVE-204ENST00000407449 APOMO95445 188 aa11.69□□□□□ -0.54
PIKFYVE-204ENST00000407449 COX6A2Q02221 97 aa11.69□□□□□ -0.54
PIKFYVE-204ENST00000407449 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
PIKFYVE-204ENST00000407449 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 LYRM9A8MSI8 78 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 WIPF1O43516 503 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 CFC1P0CG37 223 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 LITAFQ99732 161 aa11.68□□□□□ -0.54
PIKFYVE-204ENST00000407449 IGLV5-39A0A0G2JS06 123 aa11.67□□□□□ -0.54
PIKFYVE-204ENST00000407449 TSPAN13O95857 204 aa11.67□□□□□ -0.54
PIKFYVE-204ENST00000407449 TRAV13-1A0A0B4J241 112 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 A8MZ25 164 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 DEFB135Q30KP9 77 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 MUSTN1Q8IVN3 82 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 SPANXDQ9BXN6 97 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 SPANXCQ9NY87 97 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 A4D1N5 150 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 NDUFA1O15239 70 aa11.66□□□□□ -0.54
PIKFYVE-204ENST00000407449 TIMM17BO60830 172 aa11.65□□□□□ -0.54
PIKFYVE-204ENST00000407449 OCIAD2Q56VL3 154 aa11.65□□□□□ -0.54
PIKFYVE-204ENST00000407449 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.54
PIKFYVE-204ENST00000407449 GAGE6Q13070 117 aa11.64□□□□□ -0.55
PIKFYVE-204ENST00000407449 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
PIKFYVE-204ENST00000407449 VWFP04275 2813 aa11.64□□□□□ -0.55
PIKFYVE-204ENST00000407449 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
PIKFYVE-204ENST00000407449 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 SMIM1B2RUZ4 78 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 GYPEP15421 78 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 MIAQ16674 131 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 CBY1Q9Y3M2 126 aa11.63□□□□□ -0.55
PIKFYVE-204ENST00000407449 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 F5H768 121 aa11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 EIF4EBP3O60516 100 aaPredicted RBP11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 MIFP14174 115 aa11.61□□□□□ -0.55
PIKFYVE-204ENST00000407449 F8W1H4 67 aa11.6□□□□□ -0.55
PIKFYVE-204ENST00000407449 H3BMG7 143 aa11.6□□□□□ -0.55
PIKFYVE-204ENST00000407449 K7ERU9 68 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms