RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 DNAJC9-AS1A6NH13 148 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 ADARB2-AS1A8MUL3 147 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 K7EQD1 137 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 LST1O00453 97 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 SPINK8P0C7L1 97 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 LINC00612Q8N6U2 182 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 IGHV3-64A0A075B6Q5 118 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 A8MZ25 164 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 PRB1P04280 392 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 AKAP6Q13023 2319 aa2.74□□□□□ -1.97
RTN4-209ENST00000405240 TMEM262E9PQX1 116 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 H3BT86 120 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 MT-ATP8P03928 68 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SMAGPQ0VAQ4 97 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 LINC00308Q8TCZ7 52 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SPTBN4Q9H254 2564 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 CCL24O00175 119 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 IGLV1-51P01701 117 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 RNASE1P07998 156 aaKnown RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 Q6Q795 121 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SOSTDC1Q6X4U4 206 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 DYNLRB2Q8TF09 96 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SPTAN1Q13813 2472 aaKnown RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 FLNCQ14315 2725 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 TRBV6-4A0A1B0GX49 114 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 C9JAW5 83 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 MRPL23Q16540 153 aaKnown RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 SFTA2Q6UW10 78 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 USP9XQ93008 2570 aaPredicted RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 COL12A1Q99715 3063 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 IGHV3-38A0A0C4DH36 116 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 HERV-K104P63124 156 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 LCE2DQ5TA82 110 aaPredicted RBP2.73□□□□□ -1.97
RTN4-209ENST00000405240 Q6ZTI0 123 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 C16orf74Q96GX8 76 aa2.73□□□□□ -1.97
RTN4-209ENST00000405240 STHQ8IWL8 128 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
RTN4-209ENST00000405240 NDUFA7O95182 113 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 RPL36AP83881 106 aaKnown RBP2.72□□□□□ -1.97
RTN4-209ENST00000405240 RPL36ALQ969Q0 106 aaKnown RBP2.72□□□□□ -1.97
RTN4-209ENST00000405240 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
RTN4-209ENST00000405240 XCL2Q9UBD3 114 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 PDZD2O15018 2839 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 NBASA2RRP1 2371 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 HTN1P15515 57 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 FHL2Q14192 279 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 COPS9Q8WXC6 57 aa2.72□□□□□ -1.97
RTN4-209ENST00000405240 A0A1B0GV72 72 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 ZANQ9Y493 2812 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 TRGV1A0A0A0MS02 117 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 COX7A2LO14548 114 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 FAM222AQ5U5X8 452 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 LINC01561Q8N1V8 128 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 WFDC11Q8NEX6 87 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 NTN5Q8WTR8 489 aaPredicted RBP2.71□□□□□ -1.98
RTN4-209ENST00000405240 Q9H8V8 135 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 PIEZO1Q92508 2521 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 TEX49A0A1B0GTD5 131 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 TRACP01848 142 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 PF4P02776 101 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 NHLRC4P0CG21 123 aaPredicted RBP2.71□□□□□ -1.98
RTN4-209ENST00000405240 CKS1BP61024 79 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 CIRBPQ14011 172 aaKnown RBP2.71□□□□□ -1.98
RTN4-209ENST00000405240 HIST2H2BDQ6DRA6 164 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 KIR2DL5BQ8NHK3 375 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 UBE2WQ96B02 151 aa2.71□□□□□ -1.98
RTN4-209ENST00000405240 CHD8Q9HCK8 2581 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 NCOR2Q9Y618 2525 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 IGHV3OR16-9A0A0B4J2B5 98 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 RPL28P46779 137 aaKnown RBP2.7□□□□□ -1.98
RTN4-209ENST00000405240 OXLD1Q5BKU9 147 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 CLEC2BQ92478 149 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 TMEM243Q9BU79 118 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 TRAV26-1A0A087WT03 109 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 COX6CP09669 75 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 OBSCN-AS1Q96MR7 158 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
RTN4-209ENST00000405240 TEX15Q9BXT5 2789 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 IGKV2-28A0A075B6P5 120 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 A0A087WZ39 114 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 CRLF1O75462 422 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 LY6G6DO95868 133 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 IGKV2D-28P01615 120 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 PRSS2P07478 247 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 KRTAP10-3P60369 221 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
RTN4-209ENST00000405240 TRBV6-8A0A0A6YYG3 113 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 TRBV7-7A0A0K0K1E9 115 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 A0A1B0GUV1 79 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 H7C2G1 150 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 DAND5Q8N907 189 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 APCP25054 2843 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 USP24Q9UPU5 2620 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 TRAV8-4A0A0B4J246 113 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms