RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 NCOR1O75376 2440 aa2.3□□□□□ -2.04
HMGB1P10-201ENST00000395823 NCOR2Q9Y618 2525 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 SBF2Q86WG5 1849 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 TRBV7-3A0A075B6L6 115 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 TRAV12-3A0A0B4J271 114 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 H7BZZ5 65 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 KRTAP10-1P60331 282 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 UBE2D3P61077 147 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 UBE2D2P62837 147 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 PDE6HQ13956 83 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 ELOBQ15370 118 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 CFAP126Q5VTH2 177 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 KRTAP26-1Q6PEX3 210 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 LYPD5Q6UWN5 251 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 VMO1Q7Z5L0 202 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 Q8TAT8 98 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 HIGD1BQ9P298 99 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 C2CD3Q4AC94 2353 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 MCM3APO60318 1980 aa2.29□□□□□ -2.04
HMGB1P10-201ENST00000395823 PPLO60437 1756 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 LRRIQ1Q96JM4 1722 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 PAPPAQ13219 1627 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 ARHGEF5Q12774 1597 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 C1orf167Q5SNV9 1468 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 LOC285095A0A1B0GVY8 99 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 EDDM3BP56851 147 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 Q8N6K4 173 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 IFI27L1Q96BM0 104 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 ODF3Q96PU9 254 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 ORMDL1Q9P0S3 153 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 SPEGQ15772 3267 aa2.28□□□□□ -2.04
HMGB1P10-201ENST00000395823 QSER1Q2KHR3 1735 aa2.28□□□□□ -2.05
HMGB1P10-201ENST00000395823 USP54Q70EL1 1684 aa2.28□□□□□ -2.05
HMGB1P10-201ENST00000395823 KIAA0100Q14667 2235 aaKnown RBP2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 KALRNO60229 2985 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 HIVEP2P31629 2446 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 PTPRZ1P23471 2315 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 A0A0G2JND7 137 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 C2orf70A6NJV1 201 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 CHKB-CPT1BH3BT56 60 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 PRB4P10163 310 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 C1orf137Q5JT78 98 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 XAF1Q6GPH4 301 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 SMIM5Q71RC9 77 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 MYO5CQ9NQX4 1742 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 MYO9AB2RTY4 2548 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 NOTCH2Q04721 2471 aa2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 ZFC3H1O60293 1989 aaKnown RBP2.27□□□□□ -2.05
HMGB1P10-201ENST00000395823 DNHD1Q96M86 4753 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 ABCA2Q9BZC7 2435 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 DNAH14Q0VDD8 3507 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 TRBV25-1A0A075B6N4 114 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 TMEM14DPA8MWL7 114 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 ZNF56Q15929 161 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 PRO2289Q9P1D8 64 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 PLXNC1O60486 1568 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 MYH1P12882 1939 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 NYNRINQ9P2P1 1898 aaKnown RBP2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 TRPM2O94759 1503 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 MYO9BQ13459 2157 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 CDH23Q9H251 3354 aa2.26□□□□□ -2.05
HMGB1P10-201ENST00000395823 TIAM2Q8IVF5 1701 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 PTPRSQ13332 1948 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 MYLKQ15746 1914 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 CLTCL1P53675 1640 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 A0A0J9YY99 117 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 ZNF815PA8K554 130 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 HIGD1CA8MV81 97 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 HMGN2P05204 90 aaKnown RBP2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 SFTA3P0C7M3 94 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 UBE2D1P51668 147 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 ZCCHC13Q8WW36 166 aaKnown RBP2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 MRPL36Q9P0J6 103 aaKnown RBP2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 LTBP2Q14767 1821 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 ZFYVE26Q68DK2 2539 aa2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 RP1L1Q8IWN7 2480 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P10-201ENST00000395823 HEATR5AQ86XA9 2040 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 CFAP46Q8IYW2 2715 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 COL14A1Q05707 1796 aaKnown RBP2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 Q86TA4 180 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 V9GYH0 126 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 ITSN1Q15811 1721 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 MON2Q7Z3U7 1717 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 PARP4Q9UKK3 1724 aaKnown RBP2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 HELZ2Q9BYK8 2649 aaKnown RBP2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 COL4A5P29400 1685 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 ICE1Q9Y2F5 2266 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 PARP14Q460N5 1801 aa2.24□□□□□ -2.05
HMGB1P10-201ENST00000395823 SCN11AQ9UI33 1791 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 ANK1P16157 1881 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 ATP7BP35670 1465 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms