RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
RUFY1-203ENST00000393448 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
RUFY1-203ENST00000393448 RAB37Q96AX2 223 aa12.42□□□□□ -0.42
RUFY1-203ENST00000393448 FHL2Q14192 279 aa12.42□□□□□ -0.42
RUFY1-203ENST00000393448 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
RUFY1-203ENST00000393448 UBE2D3P61077 147 aa12.4□□□□□ -0.42
RUFY1-203ENST00000393448 UBE2D2P62837 147 aa12.4□□□□□ -0.42
RUFY1-203ENST00000393448 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
RUFY1-203ENST00000393448 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
RUFY1-203ENST00000393448 FAM222AQ5U5X8 452 aa12.39□□□□□ -0.43
RUFY1-203ENST00000393448 NTM-AS1Q6ZSK4 140 aa12.39□□□□□ -0.43
RUFY1-203ENST00000393448 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
RUFY1-203ENST00000393448 VCX2Q9H322 139 aa12.39□□□□□ -0.43
RUFY1-203ENST00000393448 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
RUFY1-203ENST00000393448 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
RUFY1-203ENST00000393448 FABP2P12104 132 aa12.38□□□□□ -0.43
RUFY1-203ENST00000393448 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
RUFY1-203ENST00000393448 PYGO1Q9Y3Y4 419 aa12.38□□□□□ -0.43
RUFY1-203ENST00000393448 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
RUFY1-203ENST00000393448 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
RUFY1-203ENST00000393448 DAZ4Q86SG3 579 aaKnown RBP12.37□□□□□ -0.43
RUFY1-203ENST00000393448 DAZ3Q9NR90 486 aaKnown RBP12.37□□□□□ -0.43
RUFY1-203ENST00000393448 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 TMEM170BQ5T4T1 132 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 Q6ZUT4 128 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
RUFY1-203ENST00000393448 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
RUFY1-203ENST00000393448 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
RUFY1-203ENST00000393448 AMELXQ99217 191 aa12.35□□□□□ -0.43
RUFY1-203ENST00000393448 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
RUFY1-203ENST00000393448 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
RUFY1-203ENST00000393448 Q8NAQ8 132 aa12.34□□□□□ -0.43
RUFY1-203ENST00000393448 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
RUFY1-203ENST00000393448 RNF183Q96D59 192 aa12.34□□□□□ -0.43
RUFY1-203ENST00000393448 CELA1Q9UNI1 258 aa12.34□□□□□ -0.43
RUFY1-203ENST00000393448 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.44
RUFY1-203ENST00000393448 E9PLD3 99 aa12.33□□□□□ -0.44
RUFY1-203ENST00000393448 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
RUFY1-203ENST00000393448 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
RUFY1-203ENST00000393448 NFE4Q86UQ8 179 aa12.32□□□□□ -0.44
RUFY1-203ENST00000393448 SIGMAR1Q99720 223 aa12.32□□□□□ -0.44
RUFY1-203ENST00000393448 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
RUFY1-203ENST00000393448 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
RUFY1-203ENST00000393448 FXYD2P54710 66 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 DGAT2L7PQ6IED9 249 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 RETNQ9HD89 108 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 DNAH3Q8TD57 4116 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 IGHV3-64A0A075B6Q5 118 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
RUFY1-203ENST00000393448 SBSPONQ8IVN8 264 aa12.31□□□□□ -0.44
RUFY1-203ENST00000393448 MIFP14174 115 aa12.3□□□□□ -0.44
RUFY1-203ENST00000393448 GCSHP23434 173 aa12.3□□□□□ -0.44
RUFY1-203ENST00000393448 GYPEP15421 78 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 CRYBA4P53673 196 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 SMAGPQ0VAQ4 97 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 NBEAL1Q6ZS30 2694 aa12.29□□□□□ -0.44
RUFY1-203ENST00000393448 A0A096LPF7 62 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 DAD1P61803 113 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 K7ERJ3 54 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 HERVK_113P61574 105 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 MRPS36P82909 103 aaKnown RBP12.28□□□□□ -0.44
RUFY1-203ENST00000393448 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
RUFY1-203ENST00000393448 A0A0J9YY99 117 aa12.27□□□□□ -0.44
RUFY1-203ENST00000393448 TMEM223A0PJW6 202 aa12.27□□□□□ -0.44
RUFY1-203ENST00000393448 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.44
RUFY1-203ENST00000393448 PRO0255Q9UI72 69 aa12.27□□□□□ -0.44
RUFY1-203ENST00000393448 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
RUFY1-203ENST00000393448 TIMM21Q9BVV7 248 aa12.27□□□□□ -0.45
RUFY1-203ENST00000393448 TENM3Q9P273 2699 aa12.27□□□□□ -0.45
RUFY1-203ENST00000393448 UBE2L6O14933 153 aa12.26□□□□□ -0.45
RUFY1-203ENST00000393448 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
RUFY1-203ENST00000393448 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
RUFY1-203ENST00000393448 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
RUFY1-203ENST00000393448 PRB2P02812 416 aaPredicted RBP12.26□□□□□ -0.45
RUFY1-203ENST00000393448 GAGE6Q13070 117 aa12.26□□□□□ -0.45
RUFY1-203ENST00000393448 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
RUFY1-203ENST00000393448 A0A1B0GV72 72 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 UBE2D1P51668 147 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 F8W1H4 67 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 PAX4O43316 350 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 WFDC2Q14508 124 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 TM2D2Q9BX73 214 aa12.25□□□□□ -0.45
RUFY1-203ENST00000393448 SPART-AS1P0CW21 52 aa12.24□□□□□ -0.45
RUFY1-203ENST00000393448 HTN3P15516 51 aa12.24□□□□□ -0.45
RUFY1-203ENST00000393448 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
RUFY1-203ENST00000393448 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
RUFY1-203ENST00000393448 TRAV8-3A0A0A6YYJ7 113 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 TINCRA0A1B0GVN0 87 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 J3QR89 54 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 CDC42SE2Q9NRR3 84 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 NHP2Q9NX24 153 aaKnown RBP12.23□□□□□ -0.45
RUFY1-203ENST00000393448 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 J3QQQ9 107 aa12.23□□□□□ -0.45
RUFY1-203ENST00000393448 COX6A2Q02221 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms