RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TIRAPP58753 221 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 TRIAP1O43715 76 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 TSHBP01222 138 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 OXLD1Q5BKU9 147 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 A0A1W2PPR1 153 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 COX7A2LO14548 114 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 POLR2KP53803 58 aaKnown RBP9.1□□□□□ -0.95
COLCA1-201ENST00000355430 KIR2DL5BQ8NHK3 375 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 TRBV6-5A0A0K0K1A5 114 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 KLLNB2CW77 178 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 A8MZ25 164 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 ORMDL1Q9P0S3 153 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
COLCA1-201ENST00000355430 BRCA2P51587 3418 aa9.09□□□□□ -0.95
COLCA1-201ENST00000355430 EDN2P20800 178 aa9.09□□□□□ -0.95
COLCA1-201ENST00000355430 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
COLCA1-201ENST00000355430 UBL5Q9BZL1 73 aa9.09□□□□□ -0.95
COLCA1-201ENST00000355430 IGLV10-54A0A075B6I4 117 aa9.09□□□□□ -0.95
COLCA1-201ENST00000355430 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
COLCA1-201ENST00000355430 TRACP01848 142 aa9.08□□□□□ -0.96
COLCA1-201ENST00000355430 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
COLCA1-201ENST00000355430 IGKV3D-7A0A0C4DH55 119 aa9.08□□□□□ -0.96
COLCA1-201ENST00000355430 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
COLCA1-201ENST00000355430 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
COLCA1-201ENST00000355430 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 IGLV1-40P01703 118 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
COLCA1-201ENST00000355430 HAMPP81172 84 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 LY6G6CO95867 125 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
COLCA1-201ENST00000355430 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 CRYGDP07320 174 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 H0YGX0 51 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 XGP55808 180 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 NDUFA1O15239 70 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 PRM2P04554 102 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 Q6ZTI0 123 aa9.06□□□□□ -0.96
COLCA1-201ENST00000355430 NUPR2A6NF83 97 aa9.05□□□□□ -0.96
COLCA1-201ENST00000355430 LECT2O14960 151 aa9.05□□□□□ -0.96
COLCA1-201ENST00000355430 HIST2H2BDQ6DRA6 164 aa9.05□□□□□ -0.96
COLCA1-201ENST00000355430 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
COLCA1-201ENST00000355430 SPTBN4Q9H254 2564 aa9.04□□□□□ -0.96
COLCA1-201ENST00000355430 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
COLCA1-201ENST00000355430 ANKRD11Q6UB99 2663 aaPredicted RBP9.04□□□□□ -0.96
COLCA1-201ENST00000355430 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
COLCA1-201ENST00000355430 C18orf65Q6ZTR6 163 aa9.04□□□□□ -0.96
COLCA1-201ENST00000355430 PYGO1Q9Y3Y4 419 aa9.04□□□□□ -0.96
COLCA1-201ENST00000355430 DSCR8Q96T75 97 aa9.03□□□□□ -0.96
COLCA1-201ENST00000355430 CEP295Q9C0D2 2601 aa9.03□□□□□ -0.96
COLCA1-201ENST00000355430 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
COLCA1-201ENST00000355430 UBE2D1P51668 147 aa9.02□□□□□ -0.97
COLCA1-201ENST00000355430 A0A0C4DFX4 3053 aa9.02□□□□□ -0.97
COLCA1-201ENST00000355430 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
COLCA1-201ENST00000355430 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
COLCA1-201ENST00000355430 PTPRBP23467 1997 aa9.02□□□□□ -0.97
COLCA1-201ENST00000355430 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 A0A1B0GX51 115 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 MKI67P46013 3256 aaKnown RBP9.01□□□□□ -0.97
COLCA1-201ENST00000355430 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 UBE2D4Q9Y2X8 147 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 NCR3O14931 201 aa9.01□□□□□ -0.97
COLCA1-201ENST00000355430 CXCL5P42830 114 aa9□□□□□ -0.97
COLCA1-201ENST00000355430 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
COLCA1-201ENST00000355430 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
COLCA1-201ENST00000355430 UBE2AP49459 152 aa9□□□□□ -0.97
COLCA1-201ENST00000355430 ATOX1O00244 68 aa9□□□□□ -0.97
COLCA1-201ENST00000355430 LINC00643Q86TS7 51 aa9□□□□□ -0.97
COLCA1-201ENST00000355430 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-201ENST00000355430 RBMY1FQ15415 496 aaKnown RBP8.99□□□□□ -0.97
COLCA1-201ENST00000355430 UBE2D3P61077 147 aa8.99□□□□□ -0.97
COLCA1-201ENST00000355430 UBE2D2P62837 147 aa8.99□□□□□ -0.97
COLCA1-201ENST00000355430 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
COLCA1-201ENST00000355430 CHD9Q3L8U1 2897 aa8.98□□□□□ -0.97
COLCA1-201ENST00000355430 A0A0J9YWU9 116 aa8.98□□□□□ -0.97
COLCA1-201ENST00000355430 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
COLCA1-201ENST00000355430 H7C423 109 aa8.98□□□□□ -0.97
COLCA1-201ENST00000355430 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
COLCA1-201ENST00000355430 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
COLCA1-201ENST00000355430 LST1O00453 97 aa8.97□□□□□ -0.97
COLCA1-201ENST00000355430 TIMM17BO60830 172 aa8.96□□□□□ -0.97
COLCA1-201ENST00000355430 POM121L12Q8N7R1 296 aa8.96□□□□□ -0.97
COLCA1-201ENST00000355430 IGLV1-51P01701 117 aa8.96□□□□□ -0.98
COLCA1-201ENST00000355430 WFDC10AQ9H1F0 79 aa8.96□□□□□ -0.98
COLCA1-201ENST00000355430 M0R2N4 97 aa8.95□□□□□ -0.98
COLCA1-201ENST00000355430 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
COLCA1-201ENST00000355430 KPRPQ5T749 579 aaPredicted RBP8.95□□□□□ -0.98
COLCA1-201ENST00000355430 SLPIP03973 132 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 REG3AQ06141 175 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 JMJD1CQ15652 2540 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms