RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 FOXI1Q12951 378 aa9.13□□□□□ -0.95
PCDHB11-201ENST00000354757 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
PCDHB11-201ENST00000354757 MT-ATP8P03928 68 aa9.12□□□□□ -0.95
PCDHB11-201ENST00000354757 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 VSIG2Q96IQ7 327 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 RNF183Q96D59 192 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 ITPR1Q14643 2758 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 TAL2Q16559 108 aa9.11□□□□□ -0.95
PCDHB11-201ENST00000354757 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
PCDHB11-201ENST00000354757 ITPR2Q14571 2701 aa9.1□□□□□ -0.95
PCDHB11-201ENST00000354757 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
PCDHB11-201ENST00000354757 CRIP2P52943 208 aaPredicted RBP9.1□□□□□ -0.95
PCDHB11-201ENST00000354757 DAND5Q8N907 189 aa9.1□□□□□ -0.95
PCDHB11-201ENST00000354757 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 KLLNB2CW77 178 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 E9PLD3 99 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 SLC25A20O43772 301 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 MRPL23Q16540 153 aaKnown RBP9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 Q9H8V8 135 aa9.09□□□□□ -0.95
PCDHB11-201ENST00000354757 MED14OSP0DP75 135 aa9.09□□□□□ -0.96
PCDHB11-201ENST00000354757 KLK12Q9UKR0 248 aa9.09□□□□□ -0.96
PCDHB11-201ENST00000354757 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
PCDHB11-201ENST00000354757 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
PCDHB11-201ENST00000354757 Q6ZUT4 128 aa9.08□□□□□ -0.96
PCDHB11-201ENST00000354757 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
PCDHB11-201ENST00000354757 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 RBMY1DP0C7P1 496 aaKnown RBP9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 RBMY1A1P0DJD3 496 aaKnown RBP9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 RBMY1CP0DJD4 496 aa9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
PCDHB11-201ENST00000354757 HERVK_113P63121 156 aa9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 DAZ2Q13117 558 aaKnown RBP9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 CFAP126Q5VTH2 177 aa9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 TEN1Q86WV5 123 aa9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 ICOSQ9Y6W8 199 aa9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
PCDHB11-201ENST00000354757 M0QY20 66 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 IFITM1P13164 125 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 LINC00467Q9BRT7 94 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 A0A096LNJ9 63 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
PCDHB11-201ENST00000354757 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 TRAV4A0A0B4J268 109 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 RELNP78509 3460 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 LEPROTO15243 131 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 CRYGDP07320 174 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 RETNQ9HD89 108 aa9.04□□□□□ -0.96
PCDHB11-201ENST00000354757 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
PCDHB11-201ENST00000354757 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
PCDHB11-201ENST00000354757 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.96
PCDHB11-201ENST00000354757 SOCS3O14543 225 aa9.02□□□□□ -0.96
PCDHB11-201ENST00000354757 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.96
PCDHB11-201ENST00000354757 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.96
PCDHB11-201ENST00000354757 EDA2RQ9HAV5 297 aa9.02□□□□□ -0.96
PCDHB11-201ENST00000354757 ZANQ9Y493 2812 aa9.02□□□□□ -0.97
PCDHB11-201ENST00000354757 NDUFA7O95182 113 aa9.02□□□□□ -0.97
PCDHB11-201ENST00000354757 NRACQ8N912 160 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 A4D1N5 150 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 TCL1BO95988 128 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 XGP55808 180 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 CCL18P55774 89 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
PCDHB11-201ENST00000354757 TRBV10-1A0A0K0K1A3 114 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 SPATA25Q9BR10 227 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 CFC1BP0CG36 223 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 CFC1P0CG37 223 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
PCDHB11-201ENST00000354757 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
PCDHB11-201ENST00000354757 CDKN2A-AS1Q9UH64 79 aa8.99□□□□□ -0.97
PCDHB11-201ENST00000354757 A8MZ25 164 aa8.99□□□□□ -0.97
PCDHB11-201ENST00000354757 DEFB131BA0A096LNP1 70 aa8.99□□□□□ -0.97
PCDHB11-201ENST00000354757 BRI3O95415 125 aa8.98□□□□□ -0.97
PCDHB11-201ENST00000354757 HERV-K104P63124 156 aa8.98□□□□□ -0.97
PCDHB11-201ENST00000354757 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
PCDHB11-201ENST00000354757 U3KQK5 164 aa8.97□□□□□ -0.97
PCDHB11-201ENST00000354757 COX7A2LO14548 114 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms