RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SPART-AS1P0CW21 52 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 LRRC75A-AS1Q8N1F1 130 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 C9orf66Q5T8R8 295 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 ORMDL1Q9P0S3 153 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 C18orf65Q6ZTR6 163 aa5.3□□□□□ -1.56
VCAN-202ENST00000342785 IGHV3-30P01768 117 aa5.3□□□□□ -1.56
VCAN-202ENST00000342785 IGHV3-30-5P0DP03 117 aa5.3□□□□□ -1.56
VCAN-202ENST00000342785 BPTFQ12830 3046 aa5.3□□□□□ -1.56
VCAN-202ENST00000342785 HECTD1Q9ULT8 2610 aa5.3□□□□□ -1.56
VCAN-202ENST00000342785 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 TIRAPP58753 221 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 UFSP1Q6NVU6 142 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 SPANXDQ9BXN6 97 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 TET2Q6N021 2002 aaPredicted RBP5.29□□□□□ -1.56
VCAN-202ENST00000342785 COL4A2P08572 1712 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 IGLV2-18A0A075B6J9 118 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 TRIAP1O43715 76 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 SPANXCQ9NY87 97 aa5.29□□□□□ -1.56
VCAN-202ENST00000342785 MT-ATP8P03928 68 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 Q9HAA7 133 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 UBE2DNLQ8IWF7 75 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 IGKV2D-24A0A075B6R9 120 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 AGRNO00468 2067 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 PSCAO43653 123 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 C1orf43Q9BWL3 253 aa5.28□□□□□ -1.56
VCAN-202ENST00000342785 BRI3O95415 125 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 INSL3P51460 131 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 F8WEM9 126 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 PIK3CD-AS1Q5SR53 167 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 UNC80Q8N2C7 3258 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 FAM236AA0A1B0GUQ0 79 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 FAM236BA0A1B0GV22 79 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 LINC01006Q8NI28 216 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 ODF3L2Q3SX64 289 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 FAM222AQ5U5X8 452 aa5.27□□□□□ -1.57
VCAN-202ENST00000342785 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 UBE2D1P51668 147 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 KRTAP10-9P60411 292 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 TNRC6BQ9UPQ9 1833 aaKnown RBP5.26□□□□□ -1.57
VCAN-202ENST00000342785 CFAP54Q96N23 3096 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 TRBV6-4A0A1B0GX49 114 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 NDUFA1O15239 70 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 WFDC10AQ9H1F0 79 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 UBE2D4Q9Y2X8 147 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 CXCL5P42830 114 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 USP24Q9UPU5 2620 aa5.26□□□□□ -1.57
VCAN-202ENST00000342785 IGLV4-69A0A075B6H9 119 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 MRPS36P82909 103 aaKnown RBP5.25□□□□□ -1.57
VCAN-202ENST00000342785 TRBV6-8A0A0A6YYG3 113 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 POM121L12Q8N7R1 296 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 SS18L2Q9UHA2 77 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 LINC00269Q8N2A0 174 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 ZNF843Q8N446 348 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 TSPEAR-AS2P59090 65 aa5.25□□□□□ -1.57
VCAN-202ENST00000342785 F8P00451 2351 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 ADAMTS20P59510 1910 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 PCSK5Q92824 1860 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 JMJD7-PLA2G4BH0Y9G9 81 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 TIMM17BO60830 172 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 KIF25-AS1Q9Y6Z4 181 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 IBA57-AS1B1ANH7 110 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 C14orf132Q9NPU4 83 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 ZNF580Q9UK33 172 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 ZNF292O60281 2723 aa5.24□□□□□ -1.57
VCAN-202ENST00000342785 TRIOO75962 3097 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 PRUNE2Q8WUY3 3088 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 LINC00242Q5T6M2 205 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 RNF183Q96D59 192 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 CITED1Q99966 193 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 NCR3O14931 201 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 TRACP01848 142 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 REG3AQ06141 175 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 SMIM9A6NGZ8 99 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 H7C423 109 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
VCAN-202ENST00000342785 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
VCAN-202ENST00000342785 RMI2Q96E14 147 aa5.23□□□□□ -1.57
VCAN-202ENST00000342785 A0A1B0GX51 115 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 LST1O00453 97 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 SMIM20Q8N5G0 67 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 WDFY4Q6ZS81 3184 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 XGP55808 180 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 UBE2D3P61077 147 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 UBE2D2P62837 147 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 MGAM2Q2M2H8 2515 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 SPATA25Q9BR10 227 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 NDUFA7O95182 113 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms