RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 DEFB112Q30KQ8 113 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 SPANXA1Q9NS26 97 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 K7EQG2 157 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 M0R2P5 195 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 SNRPD3P62318 126 aaKnown RBP8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 PTPN13Q12923 2485 aa8.73□□□□□ -1.01
CCDC144CP-201ENST00000340196 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
CCDC144CP-201ENST00000340196 MSMBP08118 114 aa8.72□□□□□ -1.01
CCDC144CP-201ENST00000340196 A0A096LNT2 108 aa8.72□□□□□ -1.01
CCDC144CP-201ENST00000340196 RHOHQ15669 191 aa8.72□□□□□ -1.01
CCDC144CP-201ENST00000340196 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
CCDC144CP-201ENST00000340196 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 RBMY1BA6NDE4 496 aaKnown RBP8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 RBMY1EA6NEQ0 496 aaKnown RBP8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 H3BUA1 57 aa8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 NDUFA7O95182 113 aa8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 RBMY1DP0C7P1 496 aaKnown RBP8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 DEFB131AP59861 70 aa8.71□□□□□ -1.02
CCDC144CP-201ENST00000340196 NAV2Q8IVL1 2488 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 A0A0B4J2C4 111 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 B4DSR2 109 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 HOXD3P31249 432 aaPredicted RBP8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 SLURP1P55000 103 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 K7EMT4 169 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 KRTAP10-9P60411 292 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 TNP2Q05952 138 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 LRRC75A-AS1Q8N1F1 130 aa8.7□□□□□ -1.02
CCDC144CP-201ENST00000340196 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
CCDC144CP-201ENST00000340196 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
CCDC144CP-201ENST00000340196 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
CCDC144CP-201ENST00000340196 H7C423 109 aa8.68□□□□□ -1.02
CCDC144CP-201ENST00000340196 GHRHP01286 108 aa8.68□□□□□ -1.02
CCDC144CP-201ENST00000340196 J3QKU1 62 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 CHCHD7Q9BUK0 85 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 DEFB113Q30KQ7 82 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 WIPF1O43516 503 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 COX6A2Q02221 97 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 VSIG2Q96IQ7 327 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
CCDC144CP-201ENST00000340196 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 RPL13AP40429 203 aaKnown RBP8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 HERVK_113P63121 156 aa8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 LINC01356Q8N9X3 169 aa8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 CCDC168Q8NDH2 2452 aa8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 C9orf153Q5TBE3 101 aa8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
CCDC144CP-201ENST00000340196 H3BMM0 161 aa8.65□□□□□ -1.02
CCDC144CP-201ENST00000340196 UBE2WQ96B02 151 aa8.65□□□□□ -1.02
CCDC144CP-201ENST00000340196 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.02
CCDC144CP-201ENST00000340196 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.03
CCDC144CP-201ENST00000340196 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.03
CCDC144CP-201ENST00000340196 J3QLI3 93 aa8.65□□□□□ -1.03
CCDC144CP-201ENST00000340196 KHDC1LQ5JSQ8 128 aa8.65□□□□□ -1.03
CCDC144CP-201ENST00000340196 APCP25054 2843 aa8.65□□□□□ -1.03
CCDC144CP-201ENST00000340196 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 FAM236AA0A1B0GUQ0 79 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 FAM236BA0A1B0GV22 79 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 IGHV3-53P01767 116 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 MIAQ16674 131 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 CR1P17927 2039 aa8.64□□□□□ -1.03
CCDC144CP-201ENST00000340196 Q8N2B8 174 aa8.63□□□□□ -1.03
CCDC144CP-201ENST00000340196 C11orf44Q8N8P7 122 aa8.63□□□□□ -1.03
CCDC144CP-201ENST00000340196 J3KT08 172 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 UBE2E2Q96LR5 201 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 CITED2Q99967 270 aaPredicted RBP8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
CCDC144CP-201ENST00000340196 Q9H8V8 135 aa8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 TRBV7-7A0A0K0K1E9 115 aa8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 HELZ2Q9BYK8 2649 aaKnown RBP8.61□□□□□ -1.03
CCDC144CP-201ENST00000340196 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
CCDC144CP-201ENST00000340196 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
CCDC144CP-201ENST00000340196 FSHBP01225 129 aa8.6□□□□□ -1.03
CCDC144CP-201ENST00000340196 ZNF702PQ9H963 129 aa8.6□□□□□ -1.03
CCDC144CP-201ENST00000340196 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
CCDC144CP-201ENST00000340196 LST1O00453 97 aa8.59□□□□□ -1.03
CCDC144CP-201ENST00000340196 DGAT2L7PQ6IED9 249 aa8.59□□□□□ -1.03
CCDC144CP-201ENST00000340196 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
CCDC144CP-201ENST00000340196 FN1P02751 2386 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms