RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 C5orf38Q86SI9 138 aa13.42□□□□□ -0.26
TNFAIP2-201ENST00000333007 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
TNFAIP2-201ENST00000333007 HIST2H2BCQ6DN03 193 aa13.41□□□□□ -0.26
TNFAIP2-201ENST00000333007 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
TNFAIP2-201ENST00000333007 ATP6V0E2Q8NHE4 81 aa13.41□□□□□ -0.26
TNFAIP2-201ENST00000333007 IGKV3D-7A0A0C4DH55 119 aa13.4□□□□□ -0.26
TNFAIP2-201ENST00000333007 CITED1Q99966 193 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 K7EQD1 137 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 CFAP47Q6ZTR5 3102 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 MRPL23Q16540 153 aaKnown RBP13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 Q6YL49 198 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 RNF152Q8N8N0 203 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 ZNF580Q9UK33 172 aa13.39□□□□□ -0.27
TNFAIP2-201ENST00000333007 Q6ZTI0 123 aa13.38□□□□□ -0.27
TNFAIP2-201ENST00000333007 Q9HAA7 133 aa13.38□□□□□ -0.27
TNFAIP2-201ENST00000333007 A0A0B4J2C4 111 aa13.38□□□□□ -0.27
TNFAIP2-201ENST00000333007 DPH3Q96FX2 82 aa13.38□□□□□ -0.27
TNFAIP2-201ENST00000333007 UBE2D1P51668 147 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 TRBV10-2A0A0K0K1G8 114 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 LINC01546A6NGU7 62 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 INAFM2P0DMQ5 153 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 MIAQ16674 131 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 DMXL2Q8TDJ6 3036 aa13.37□□□□□ -0.27
TNFAIP2-201ENST00000333007 TRIAP1O43715 76 aa13.36□□□□□ -0.27
TNFAIP2-201ENST00000333007 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
TNFAIP2-201ENST00000333007 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
TNFAIP2-201ENST00000333007 ZNF702PQ9H963 129 aa13.36□□□□□ -0.27
TNFAIP2-201ENST00000333007 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
TNFAIP2-201ENST00000333007 IGHV4-31P0DP07 118 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 DEFB114Q30KQ6 69 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 KALRNO60229 2985 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 SS18Q15532 418 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 XCL1P47992 114 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 NDUFV3P56181 108 aaKnown RBP13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 HAMPP81172 84 aa13.35□□□□□ -0.27
TNFAIP2-201ENST00000333007 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP2-201ENST00000333007 DAZ2Q13117 558 aaKnown RBP13.34□□□□□ -0.27
TNFAIP2-201ENST00000333007 DAZ4Q86SG3 579 aaKnown RBP13.34□□□□□ -0.27
TNFAIP2-201ENST00000333007 DAZ3Q9NR90 486 aaKnown RBP13.34□□□□□ -0.27
TNFAIP2-201ENST00000333007 TACC2O95359 2948 aa13.32□□□□□ -0.28
TNFAIP2-201ENST00000333007 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP2-201ENST00000333007 LINC00315P59091 139 aa13.32□□□□□ -0.28
TNFAIP2-201ENST00000333007 HERV-K104P63124 156 aa13.32□□□□□ -0.28
TNFAIP2-201ENST00000333007 Q6ZSV7 163 aa13.32□□□□□ -0.28
TNFAIP2-201ENST00000333007 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
TNFAIP2-201ENST00000333007 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
TNFAIP2-201ENST00000333007 SND1-IT1Q9HBX3 110 aa13.31□□□□□ -0.28
TNFAIP2-201ENST00000333007 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
TNFAIP2-201ENST00000333007 ATP5G1P05496 136 aa13.3□□□□□ -0.28
TNFAIP2-201ENST00000333007 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
TNFAIP2-201ENST00000333007 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 H3BT86 120 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 TMEM263Q8WUH6 116 aaKnown RBP13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 UBE2D4Q9Y2X8 147 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 DNAJC9-AS1A6NH13 148 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 CRLF1O75462 422 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 MIR7-3HGQ8N6C7 128 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 MUC4Q99102 2169 aa13.28□□□□□ -0.28
TNFAIP2-201ENST00000333007 C16orf74Q96GX8 76 aa13.27□□□□□ -0.28
TNFAIP2-201ENST00000333007 CCDC179H3BU77 68 aa13.27□□□□□ -0.29
TNFAIP2-201ENST00000333007 UBE2D3P61077 147 aa13.27□□□□□ -0.29
TNFAIP2-201ENST00000333007 UBE2D2P62837 147 aa13.27□□□□□ -0.29
TNFAIP2-201ENST00000333007 COX7B2Q8TF08 81 aa13.27□□□□□ -0.29
TNFAIP2-201ENST00000333007 BRI3O95415 125 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 MRPS36P82909 103 aaKnown RBP13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 PIK3CD-AS1Q5SR53 167 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 POM121L12Q8N7R1 296 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 LECT2O14960 151 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 NDUFA7O95182 113 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 GYPEP15421 78 aa13.26□□□□□ -0.29
TNFAIP2-201ENST00000333007 F5H768 121 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 ANGP03950 147 aaKnown RBP13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 WFDC11Q8NEX6 87 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 MUC3AQ02505 3323 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 TRAV25A0A0B4J276 109 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 A0A1B0GX51 115 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
TNFAIP2-201ENST00000333007 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
TNFAIP2-201ENST00000333007 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
TNFAIP2-201ENST00000333007 KRTAP10-9P60411 292 aa13.24□□□□□ -0.29
TNFAIP2-201ENST00000333007 Q6ZSN1 163 aa13.24□□□□□ -0.29
TNFAIP2-201ENST00000333007 ATMQ13315 3056 aa13.24□□□□□ -0.29
TNFAIP2-201ENST00000333007 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
TNFAIP2-201ENST00000333007 TRACP01848 142 aa13.23□□□□□ -0.29
TNFAIP2-201ENST00000333007 DAD1P61803 113 aa13.23□□□□□ -0.29
TNFAIP2-201ENST00000333007 ADAMTSL4-AS1Q5T5F5 129 aa13.22□□□□□ -0.29
TNFAIP2-201ENST00000333007 DEFB4AO15263 64 aa13.21□□□□□ -0.29
TNFAIP2-201ENST00000333007 LRBAP50851 2863 aa13.21□□□□□ -0.29
TNFAIP2-201ENST00000333007 Q9UF83 564 aa13.21□□□□□ -0.3
TNFAIP2-201ENST00000333007 NDUFA1O15239 70 aa13.21□□□□□ -0.3
TNFAIP2-201ENST00000333007 ZNF575Q86XF7 245 aa13.21□□□□□ -0.3
TNFAIP2-201ENST00000333007 UBL5Q9BZL1 73 aa13.21□□□□□ -0.3
TNFAIP2-201ENST00000333007 F8P00451 2351 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms