RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 GAGE13Q4V321 117 aa15.5■□□□□ 0.07
SPHK1-201ENST00000323374 IGHV3-30-3P0DP02 117 aa15.49■□□□□ 0.07
SPHK1-201ENST00000323374 NOTCH2Q04721 2471 aa15.49■□□□□ 0.07
SPHK1-201ENST00000323374 IGHV3-30P01768 117 aa15.48■□□□□ 0.07
SPHK1-201ENST00000323374 IGHV3-30-5P0DP03 117 aa15.48■□□□□ 0.07
SPHK1-201ENST00000323374 UBE2D1P51668 147 aa15.48■□□□□ 0.07
SPHK1-201ENST00000323374 IGHV1-58A0A0C4DH39 117 aa15.47■□□□□ 0.07
SPHK1-201ENST00000323374 GEMIN7Q9H840 131 aaKnown RBP15.47■□□□□ 0.07
SPHK1-201ENST00000323374 TRBV6-4A0A1B0GX49 114 aa15.47■□□□□ 0.07
SPHK1-201ENST00000323374 NTM-AS1Q6ZSK4 140 aa15.47■□□□□ 0.07
SPHK1-201ENST00000323374 C9orf66Q5T8R8 295 aa15.46■□□□□ 0.07
SPHK1-201ENST00000323374 CSDC2Q9Y534 153 aaKnown RBP15.46■□□□□ 0.06
SPHK1-201ENST00000323374 TRAV8-3A0A0A6YYJ7 113 aa15.45■□□□□ 0.06
SPHK1-201ENST00000323374 TRGV4A0A0C4DH28 118 aa15.45■□□□□ 0.06
SPHK1-201ENST00000323374 LINC00694P0DN24 101 aa15.45■□□□□ 0.06
SPHK1-201ENST00000323374 TIRAPP58753 221 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 SMAGPQ0VAQ4 97 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 GTSF1LQ9H1H1 148 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 NOTCH3Q9UM47 2321 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 SBSPONQ8IVN8 264 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 C10orf126Q8N4M7 172 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 VSIG2Q96IQ7 327 aa15.44■□□□□ 0.06
SPHK1-201ENST00000323374 RBX1P62877 108 aa15.43■□□□□ 0.06
SPHK1-201ENST00000323374 PGPEP1Q9NXJ5 209 aa15.43■□□□□ 0.06
SPHK1-201ENST00000323374 TMEM238C9JI98 176 aa15.43■□□□□ 0.06
SPHK1-201ENST00000323374 CRLF1O75462 422 aa15.43■□□□□ 0.06
SPHK1-201ENST00000323374 A0A0J9YXY3 114 aa15.42■□□□□ 0.06
SPHK1-201ENST00000323374 APOMO95445 188 aa15.42■□□□□ 0.06
SPHK1-201ENST00000323374 SPINK8P0C7L1 97 aa15.42■□□□□ 0.06
SPHK1-201ENST00000323374 IGLV5-45A0A087WSX0 123 aa15.41■□□□□ 0.06
SPHK1-201ENST00000323374 SPATA3Q8NHX4 192 aa15.41■□□□□ 0.06
SPHK1-201ENST00000323374 FHL2Q14192 279 aa15.41■□□□□ 0.06
SPHK1-201ENST00000323374 OCIAD2Q56VL3 154 aa15.41■□□□□ 0.06
SPHK1-201ENST00000323374 C2CD3Q4AC94 2353 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 LOC100131303A0A0U1RQF7 123 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 TMEM243Q9BU79 118 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 CDKN2A-AS1Q9UH64 79 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 UBE2L6O14933 153 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 HERVK_113P63121 156 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 NDUFA12Q9UI09 145 aa15.4■□□□□ 0.06
SPHK1-201ENST00000323374 KIR2DL5BQ8NHK3 375 aa15.39■□□□□ 0.05
SPHK1-201ENST00000323374 CFC1BP0CG36 223 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 CFC1P0CG37 223 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 FAM19A3Q7Z5A8 133 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 CITED1Q99966 193 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 CDC42SE2Q9NRR3 84 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 LINC00242Q5T6M2 205 aa15.38■□□□□ 0.05
SPHK1-201ENST00000323374 NSD1Q96L73 2696 aaPredicted RBP15.38■□□□□ 0.05
SPHK1-201ENST00000323374 RPL24P83731 157 aaKnown RBP15.37■□□□□ 0.05
SPHK1-201ENST00000323374 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.37■□□□□ 0.05
SPHK1-201ENST00000323374 FN1P02751 2386 aaKnown RBP15.37■□□□□ 0.05
SPHK1-201ENST00000323374 SMIM9A6NGZ8 99 aa15.37■□□□□ 0.05
SPHK1-201ENST00000323374 TSPAN13O95857 204 aa15.37■□□□□ 0.05
SPHK1-201ENST00000323374 COX6A2Q02221 97 aa15.37■□□□□ 0.05
SPHK1-201ENST00000323374 TMEM101Q96IK0 257 aa15.37■□□□□ 0.05
SPHK1-201ENST00000323374 A8MZ25 164 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 H7C423 109 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 DEFB130BP0DP73 79 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 DEFB130AP0DP74 79 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 ZFAND6Q6FIF0 208 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 MUSTN1Q8IVN3 82 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 LINC00612Q8N6U2 182 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 X6R8D5 127 aa15.36■□□□□ 0.05
SPHK1-201ENST00000323374 PCP4P48539 62 aa15.35■□□□□ 0.05
SPHK1-201ENST00000323374 TRAV13-1A0A0B4J241 112 aa15.35■□□□□ 0.05
SPHK1-201ENST00000323374 A4D1N5 150 aa15.35■□□□□ 0.05
SPHK1-201ENST00000323374 LITAFQ99732 161 aa15.34■□□□□ 0.05
SPHK1-201ENST00000323374 H3BMG7 143 aa15.34■□□□□ 0.05
SPHK1-201ENST00000323374 K7ERU9 68 aa15.34■□□□□ 0.05
SPHK1-201ENST00000323374 PRO1854Q9UHT4 67 aa15.33■□□□□ 0.04
SPHK1-201ENST00000323374 F8W1H4 67 aa15.32■□□□□ 0.04
SPHK1-201ENST00000323374 SPANXDQ9BXN6 97 aa15.31■□□□□ 0.04
SPHK1-201ENST00000323374 SPANXCQ9NY87 97 aa15.31■□□□□ 0.04
SPHK1-201ENST00000323374 TRBV6-8A0A0A6YYG3 113 aa15.31■□□□□ 0.04
SPHK1-201ENST00000323374 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.31■□□□□ 0.04
SPHK1-201ENST00000323374 IGLV5-39A0A0G2JS06 123 aa15.31■□□□□ 0.04
SPHK1-201ENST00000323374 LOC107984156A0A0G2JMH3 177 aa15.3■□□□□ 0.04
SPHK1-201ENST00000323374 NDUFA1O15239 70 aa15.3■□□□□ 0.04
SPHK1-201ENST00000323374 LYRM7Q5U5X0 104 aa15.3■□□□□ 0.04
SPHK1-201ENST00000323374 ARL17AQ8IVW1 177 aa15.3■□□□□ 0.04
SPHK1-201ENST00000323374 HIVEP1P15822 2718 aa15.3■□□□□ 0.04
SPHK1-201ENST00000323374 A0A0B4J2C4 111 aa15.29■□□□□ 0.04
SPHK1-201ENST00000323374 APOC4P55056 127 aa15.29■□□□□ 0.04
SPHK1-201ENST00000323374 RNF151Q2KHN1 245 aa15.29■□□□□ 0.04
SPHK1-201ENST00000323374 PRSS2P07478 247 aa15.29■□□□□ 0.04
SPHK1-201ENST00000323374 ADAMTSL4-AS1Q5T5F5 129 aa15.29■□□□□ 0.04
SPHK1-201ENST00000323374 TIMM17BO60830 172 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 GAGE6Q13070 117 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 SFTA2Q6UW10 78 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 SMIM1B2RUZ4 78 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 MIAQ16674 131 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 C21orf62-AS1Q17RA5 79 aa15.28■□□□□ 0.04
SPHK1-201ENST00000323374 LYRM9A8MSI8 78 aa15.26■□□□□ 0.03
SPHK1-201ENST00000323374 EIF4EBP3O60516 100 aaPredicted RBP15.26■□□□□ 0.03
SPHK1-201ENST00000323374 DEFB135Q30KP9 77 aa15.26■□□□□ 0.03
SPHK1-201ENST00000323374 CHCHD5Q9BSY4 110 aa15.26■□□□□ 0.03
SPHK1-201ENST00000323374 WFDC9Q8NEX5 89 aa15.26■□□□□ 0.03
SPHK1-201ENST00000323374 GYPEP15421 78 aa15.25■□□□□ 0.03
SPHK1-201ENST00000323374 FAM222AQ5U5X8 452 aa15.25■□□□□ 0.03
SPHK1-201ENST00000323374 VWFP04275 2813 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms