RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 DAZ3Q9NR90 486 aaKnown RBP13.61□□□□□ -0.23
CD55-201ENST00000314754 A0A1B0GWB2 263 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD55-201ENST00000314754 Q6ZUT4 128 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 GAGE7O76087 117 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 GAGE12FP0CL80 117 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 GAGE12GP0CL81 117 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 GAGE12IP0CL82 117 aa13.6□□□□□ -0.23
CD55-201ENST00000314754 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
CD55-201ENST00000314754 UBE2D3P61077 147 aa13.59□□□□□ -0.23
CD55-201ENST00000314754 UBE2D2P62837 147 aa13.59□□□□□ -0.23
CD55-201ENST00000314754 TMEM238LA0A1B0GVL6 79 aa13.59□□□□□ -0.23
CD55-201ENST00000314754 A6NJY4 79 aa13.59□□□□□ -0.23
CD55-201ENST00000314754 SPANXB1Q9NS25 103 aaPredicted RBP13.59□□□□□ -0.23
CD55-201ENST00000314754 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.24
CD55-201ENST00000314754 CRLF1O75462 422 aa13.58□□□□□ -0.24
CD55-201ENST00000314754 SIGMAR1Q99720 223 aa13.58□□□□□ -0.24
CD55-201ENST00000314754 TRRAPQ9Y4A5 3859 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 IGHV3-64A0A075B6Q5 118 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 GAGE12JA6NER3 117 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 GAGE4Q13068 117 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 GAGE5Q13069 117 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 GAGE13Q4V321 117 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 DGAT2L7PQ6IED9 249 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 TEX48A0A1B0GUV7 120 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 A0A1B0GV72 72 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 TRBV6-4A0A1B0GX49 114 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 NTM-AS1Q6ZSK4 140 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 ATRQ13535 2644 aa13.56□□□□□ -0.24
CD55-201ENST00000314754 IGLL5B9A064 214 aa13.55□□□□□ -0.24
CD55-201ENST00000314754 IGHV3-30-3P0DP02 117 aa13.55□□□□□ -0.24
CD55-201ENST00000314754 UBE2D1P51668 147 aa13.55□□□□□ -0.24
CD55-201ENST00000314754 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
CD55-201ENST00000314754 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
CD55-201ENST00000314754 TEP1Q99973 2627 aaKnown RBP13.54□□□□□ -0.24
CD55-201ENST00000314754 GEMIN7Q9H840 131 aaKnown RBP13.54□□□□□ -0.24
CD55-201ENST00000314754 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 IGHV3-30P01768 117 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 IGHV3-30-5P0DP03 117 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
CD55-201ENST00000314754 SBSPONQ8IVN8 264 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 CITED1Q99966 193 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 GTSF1LQ9H1H1 148 aa13.53□□□□□ -0.24
CD55-201ENST00000314754 SMAGPQ0VAQ4 97 aa13.52□□□□□ -0.25
CD55-201ENST00000314754 SPATA25Q9BR10 227 aa13.52□□□□□ -0.25
CD55-201ENST00000314754 TRAV8-3A0A0A6YYJ7 113 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 J3QR89 54 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 TIRAPP58753 221 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
CD55-201ENST00000314754 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 IGLV5-45A0A087WSX0 123 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 C10orf126Q8N4M7 172 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 KIR2DL5BQ8NHK3 375 aa13.51□□□□□ -0.25
CD55-201ENST00000314754 LOC100131303A0A0U1RQF7 123 aa13.5□□□□□ -0.25
CD55-201ENST00000314754 GAGE12HA6NDE8 117 aa13.5□□□□□ -0.25
CD55-201ENST00000314754 FHL2Q14192 279 aa13.5□□□□□ -0.25
CD55-201ENST00000314754 F8W1H4 67 aa13.49□□□□□ -0.25
CD55-201ENST00000314754 TMEM243Q9BU79 118 aa13.49□□□□□ -0.25
CD55-201ENST00000314754 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 LINC00612Q8N6U2 182 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 X6R8D5 127 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 SPINK8P0C7L1 97 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
CD55-201ENST00000314754 HERVK_113P63121 156 aa13.47□□□□□ -0.25
CD55-201ENST00000314754 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
CD55-201ENST00000314754 PGPEP1Q9NXJ5 209 aa13.47□□□□□ -0.25
CD55-201ENST00000314754 CDC42SE2Q9NRR3 84 aa13.47□□□□□ -0.25
CD55-201ENST00000314754 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
CD55-201ENST00000314754 H7C423 109 aa13.46□□□□□ -0.25
CD55-201ENST00000314754 UBE2L6O14933 153 aa13.46□□□□□ -0.25
CD55-201ENST00000314754 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
CD55-201ENST00000314754 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
CD55-201ENST00000314754 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
CD55-201ENST00000314754 APOMO95445 188 aa13.45□□□□□ -0.26
CD55-201ENST00000314754 ZFAND6Q6FIF0 208 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 A8MZ25 164 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 CFC1BP0CG36 223 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 CFC1P0CG37 223 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 COX6A2Q02221 97 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 TMEM101Q96IK0 257 aa13.44□□□□□ -0.26
CD55-201ENST00000314754 F8P00451 2351 aa13.43□□□□□ -0.26
CD55-201ENST00000314754 LITAFQ99732 161 aa13.43□□□□□ -0.26
CD55-201ENST00000314754 TRAV13-1A0A0B4J241 112 aa13.42□□□□□ -0.26
CD55-201ENST00000314754 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 TSPAN13O95857 204 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 APOC4P55056 127 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 WFDC9Q8NEX5 89 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 A4D1N5 150 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 WFDC2Q14508 124 aa13.41□□□□□ -0.26
CD55-201ENST00000314754 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
CD55-201ENST00000314754 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
CD55-201ENST00000314754 CKS1BP61024 79 aa13.4□□□□□ -0.26
CD55-201ENST00000314754 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
CD55-201ENST00000314754 WIPF1O43516 503 aa13.39□□□□□ -0.27
CD55-201ENST00000314754 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
CD55-201ENST00000314754 PRO1854Q9UHT4 67 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms