RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Igkv6-29A0A0G2JEI6 115 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm11232Q5SPI8 295 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm2381G3UY53 305 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 P01644 108 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 P01645 108 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 P01646 108 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 P01647 108 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm16686Q3UMN9 131 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Defb5Q9EPV9 64 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Cd8bP10300 213 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Fxyd7P59648 80 aa13.76□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Tcrg-C1A0A075B5Z0 172 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Smim20D3Z7Q2 69 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Trbv12-2A0A0B4J1H1 124 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Iah1Q9DB29 249 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Adamtsl3G3UXC7 1706 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ypel3P61237 119 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Prss58Q8BW11 241 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Defb6Q91VD6 63 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Plac1Q9JI83 173 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Mfap5Q9QZJ6 164 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gbf1Q6DFZ1 1861 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 G430049J08RikQ3TL09 166 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm10118Q8C8J5 116 aa13.75□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm37388A0A0A6YY46 143 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 YrdcQ3U5F4 280 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 H2afb1Q9CQ70 111 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Spta1P08032 2415 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Trbv3A0A0A6YYE2 117 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ubr2Q6WKZ8 1755 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Lamb2Q61292 1799 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Snrnp40Q6PE01 358 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Egr4Q9WUF2 478 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Rasl10bQ5SSG5 203 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Il17bQ9QXT6 180 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm9857F7CXR1 130 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Kif26bQ7TNC6 2112 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Dmrt3Q80WT2 476 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Vmn1r216Q8R257 298 aa13.74□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Igkv15-103A0A140T8P3 115 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Defb20Q30KP3 96 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ppp1r27Q9D119 154 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 CtsbP10605 339 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Rspo3Q2TJ95 277 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Cela1Q91X79 266 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ubald2Q8BQH4 164 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Insig2Q91WG1 225 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Phf3B2RQG2 2025 aaKnown RBP13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Mast2Q60592 1734 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ms4a8Q99N10 290 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Mrpl52Q9D0Y8 121 aa13.73□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Arid1bE9Q4N7 2244 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm4894Q8CA09 118 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Tmem178aQ9CZ16 297 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Qrich2A0A140LIY9 2337 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Heatr5bQ8C547 2070 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Igkv4-91A0A075B5L2 119 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Tm2d3Q8BJ83 261 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Defa27F2Z403 93 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Q8VE95 218 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Prss41Q920S2 322 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Q9D8L0 127 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Ear14F6YUX7 155 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Col18a1P39061 1774 aa13.72□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Tpsb2P21845 276 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Gm10306Q9CUK2 115 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 B1ARW8 110 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Efnb1P52795 345 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Nxph1Q61200 271 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Rnf182Q8C432 247 aa13.71□□□□□ -0.21
Col17a1-202ENSMUST00000086923 Dennd4aE9Q8V6 1869 aa13.71□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Gm26727M0QWT1 121 aa13.71□□□□□ -0.22
Col17a1-202ENSMUST00000086923 MycbQ6P8Z1 170 aa13.71□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Ormdl2Q9CQZ0 153 aa13.71□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Trbv13-3A0A0B4J1H2 113 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 P01746 140 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 CckP09240 115 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Ucp1P12242 307 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Trdv4Q5R1A3 115 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Olfr761Q7TRJ0 323 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Igll1P20764 209 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Xcl1P47993 114 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Mob4Q6PEB6 225 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Gm9881Q8BR56 211 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Wdr5bQ9D7H2 328 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Wipf2Q6PEV3 440 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Rhno1Q8K3A4 235 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Rab1bQ9D1G1 201 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Fndc7A2AED3 737 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Samd13D3YUG0 102 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 A630023A22RikJ3QP60 199 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Pglyrp4Q0VB07 374 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Trav2Q5R1I9 109 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Prb1Q91X93 504 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Slc25a15Q9WVD5 301 aa13.7□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Ighv5-6A0A075B5Q0 117 aa13.69□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Gm6525A0A0A6YW33 106 aa13.69□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Ca5aP23589 299 aa13.69□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Pax9P47242 342 aa13.69□□□□□ -0.22
Col17a1-202ENSMUST00000086923 Bricd5Q8BV89 174 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms