RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Defa9P50707 93 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Atp6v0cP63082 155 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 UngP97931 306 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Spint3Q3UW09 88 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ammecr1lQ8JZZ6 310 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem50aQ9CXL1 157 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Sox15P43267 231 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr1535Q7TQU0 326 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr1336Q8VGH5 314 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Pip4p2Q9CZX7 257 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 AmtnQ9D3J8 213 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cbln3Q9JHG0 197 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Plxnb3Q9QY40 1902 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Zfp648D3Z0W3 525 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 A730015C16RikQ8C992 119 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ms4a8Q99N10 290 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv1-18A0A0A6YXN4 117 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 LtbP41155 306 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Pate4Q09098 99 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Nr2c2apQ3TV70 140 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr1419Q7TQS2 343 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tcrg-V6A0A075B5Y8 134 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Defa13P50711 93 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Fbln7Q501P1 440 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ube2d2bQ6ZWY6 147 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem160Q9D938 188 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 RlfA2A7F4 1918 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm17727E9Q4V7 109 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr177E9Q7W1 309 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 P01649 108 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ca5aP23589 299 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm16503Q8C6M9 103 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Npc2Q9Z0J0 149 aa8.49□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igkv5-37A0A140T8N4 115 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rnase2O35291 155 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist3h2bbQ8CGP0 126 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist3h2baQ9D2U9 126 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rabac1Q9Z0S9 185 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rspo1Q9Z132 265 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm45753A0A1C7CYU8 86 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm21983D6RFS9 131 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tm4sf19E9Q9H8 206 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Bsph1Q3UW26 133 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem177Q8BPE4 311 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Slc16a4Q8R0M8 500 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cnn3Q9DAW9 330 aaKnown RBP8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 IcosQ9WVS0 200 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igsf23B2RTN2 239 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Snrpd3P62320 126 aaKnown RBP8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Wnt5bP22726 359 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 D630044L22RikQ8C701 164 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Bhlha15Q9QYC3 197 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Klk4Q9Z0M1 255 aa8.48□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Nup210Q9QY81 1886 aaKnown RBP8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Trav16nA0A075B634 117 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rpl36-ps4A0A140T8U4 117 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm9242J3QNY1 357 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Pax1P09084 446 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Timp3P39876 211 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 RetnlgQ8K426 117 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Wnt2P21552 360 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Zg16Q8K0C5 167 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 MNCb-2875Q9DCB3 74 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cacna1hO88427 2365 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igkv6-15A0A140T8M5 115 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cypt3B1AY64 174 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist1h2bfP10853 126 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tac3P55099 116 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Jsrp1Q3MI48 332 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist1h2bbQ64475 126 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rnf144bQ8BKD6 301 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Defa22Q8C1N8 93 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist1h2bkQ8CGP1 126 aaKnown RBP8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Hist1h2bpQ8CGP2 126 aaKnown RBP8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 4931428L18RikQ9D4S9 127 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Heatr5bQ8C547 2070 aa8.47□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 BatfO35284 125 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 5930422O12RikQ8C4Y4 123 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem91Q8C581 172 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Nrn1Q8CFV4 142 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Srsf9Q9D0B0 222 aaKnown RBP8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 1700015F17RikD3YUK8 150 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm10203F6QJ09 66 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Dkk1O54908 272 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Il3raP26952 396 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cdkn1aP39689 159 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Loxl2P58022 776 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 MymxQ2Q5T5 84 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Zic3Q62521 466 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rpl24Q8BP67 157 aaKnown RBP8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Derl1Q99J56 251 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Atg101Q9D8Z6 218 aa8.46□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv1-20A0A0A6YX66 117 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 P01725 110 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Dynlt3P56387 116 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 KncnQ307W7 124 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ttc9cQ810A3 171 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Fam168aQ8BGZ2 244 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Q9DAA3 117 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rnf166Q3U9F6 237 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 152.8 ms