RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Timp3P39876 211 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Wfdc21Q8BTE6 63 aa7.65□□□□□ -1.18
Ccdc47-201ENSMUST00000002043 Ucp1P12242 307 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tspan13Q9D8C2 204 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Slc25a39Q9D8K8 359 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Adamtsl3G3UXC7 1706 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Efnb3O35393 340 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P01638 115 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P18525 117 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Snx22Q8C084 192 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dkk2Q9QYZ8 259 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ovol1Q9WTJ2 267 aa7.65□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Trav16d-dv11A0A075B617 117 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm7849D3YX03 116 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tex54G3UW99 86 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 P01783 136 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Thy1P01831 162 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Mrps21P58059 87 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Morn2Q6UL01 79 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Zfp420Q7TMN8 578 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr491Q8VG06 310 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 MNCb-2875Q9DCB3 74 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm17660B9UIU9 90 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Sod1P08228 154 aaKnown RBP7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tnfrsf9P20334 256 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Reg1P43137 165 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tcl1b2P56841 117 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Csrp1P97315 193 aaKnown RBP7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Jpt2Q6PGH2 190 aaKnown RBP7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 A730015C16RikQ8C992 119 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr1402Q8VET1 320 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Fbln5Q9WVH9 448 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm26938S4R185 226 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm867A0A1W2P7T4 151 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm28038F7BCN9 126 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Csf2rb2P26954 878 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 UngP97931 306 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Usmg5Q78IK2 58 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Q8CF25 301 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Q9CQM1 111 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tmem167aQ9CR64 72 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Spata45Q9CVW4 97 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ighv6-3A0A075B5T2 118 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tcrg-C1A0A075B5Z0 172 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm45871A0A1B0GRI9 540 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tcrg-C3L7N479 172 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ly86O88188 162 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gng7Q61016 68 aa7.64□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Nkx2-8O70584 235 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hist1h2bfP10853 126 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defa1P11477 93 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dynlt3P56387 116 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Wfdc18P62810 74 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Col9a1Q05722 921 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hist1h2bbQ64475 126 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tmem30bQ8BHG3 353 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Dcaf12l1Q8CBW4 501 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hist1h2bkQ8CGP1 126 aaKnown RBP7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hist1h2bpQ8CGP2 126 aaKnown RBP7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr484Q8VFD3 321 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Nat6Q9R123 314 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 PhipQ8VDD9 1821 aaKnown RBP7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cacna1hO88427 2365 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ighv7-3A0A075B5R2 120 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Spint3Q3UW09 88 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Lhfpl4Q5U4E0 247 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr976Q8VF15 326 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr984Q8VFN1 314 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 V1ra8Q9EQ48 279 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Zfp119aQ9JIC0 545 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cacna1iE9Q7P2 2199 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ighv1-34A0A075B5V2 117 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Trav7n-4A0A075B620 113 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hbb-b2P02089 147 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cox8bP48772 70 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Adra2aQ01338 450 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Fam53bQ8BGR5 422 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Vmn1r197Q8R265 298 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 AY761184Q9D848 116 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 VirmaA2AIV2 1811 aaKnown RBP7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Olfr749E9Q438 313 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tm4sf19E9Q9H8 206 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Znf260Q62513 407 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Wbp2nlQ9D529 359 aa7.63□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Foxi3E0CZH3 425 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Tmem255bQ5FW56 369 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Q8BTC1 67 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Defa16P50714 93 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Cd59bP58019 129 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 GchfrP99025 84 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Ang6Q5GAN0 147 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Spink2Q8BMY7 86 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Pradc1Q9D9N8 188 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Nit2Q9JHW2 276 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Klf13Q9JJZ6 289 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm5089A1L3C8 106 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hbb-bsA8DUK4 147 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Hbb-b1P02088 147 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Rnf166Q3U9F6 237 aa7.62□□□□□ -1.19
Ccdc47-201ENSMUST00000002043 Gm4894Q8CA09 118 aa7.62□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms