RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A RPS10BP46784 105 aaKnown RBP16.14■□□□□ 0.17
TRN1tP(UGG)A SNG1P46950 547 aa16.14■□□□□ 0.17
TRN1tP(UGG)A RSM26P47141 266 aa16.14■□□□□ 0.17
TRN1tP(UGG)A PRP24P49960 444 aaKnown RBP16.14■□□□□ 0.17
TRN1tP(UGG)A NMA111P53920 997 aa16.14■□□□□ 0.17
TRN1tP(UGG)A YDR344CQ05510 147 aa16.14■□□□□ 0.17
TRN1tP(UGG)A GRX8Q05926 109 aa16.14■□□□□ 0.17
TRN1tP(UGG)A RPS10AQ08745 105 aaPredicted RBP16.14■□□□□ 0.17
TRN1tP(UGG)A CDC24P11433 854 aaPredicted RBP16.13■□□□□ 0.17
TRN1tP(UGG)A SPO16P17122 198 aa16.13■□□□□ 0.17
TRN1tP(UGG)A MET22P32179 357 aa16.13■□□□□ 0.17
TRN1tP(UGG)A RAD5P32849 1169 aaPredicted RBP16.13■□□□□ 0.17
TRN1tP(UGG)A CKB2P38930 258 aa16.13■□□□□ 0.17
TRN1tP(UGG)A BST1P43571 1029 aa16.13■□□□□ 0.17
TRN1tP(UGG)A YJL132WP47014 750 aa16.13■□□□□ 0.17
TRN1tP(UGG)A TCB2P48231 1178 aa16.13■□□□□ 0.17
TRN1tP(UGG)A DOS2P54858 310 aa16.13■□□□□ 0.17
TRN1tP(UGG)A RPL22BP56628 122 aaKnown RBP16.13■□□□□ 0.17
TRN1tP(UGG)A TOF2Q02208 771 aa16.13■□□□□ 0.17
TRN1tP(UGG)A ATM1P40416 690 aa16.12■□□□□ 0.17
TRN1tP(UGG)A MND2P40577 368 aa16.12■□□□□ 0.17
TRN1tP(UGG)A MRX6P48564 524 aa16.12■□□□□ 0.17
TRN1tP(UGG)A TMN2Q04562 672 aa16.12■□□□□ 0.17
TRN1tP(UGG)A CBC2Q08920 208 aaKnown RBP RIP-Chip data16.12■□□□□ 0.17not detected
TRN1tP(UGG)A YML002WP0CF17 737 aa16.11■□□□□ 0.17
TRN1tP(UGG)A MGT1P26188 188 aa16.11■□□□□ 0.17
TRN1tP(UGG)A KAP104P38217 918 aaKnown RBP16.11■□□□□ 0.17
TRN1tP(UGG)A PPE1P38796 400 aa16.11■□□□□ 0.17
TRN1tP(UGG)A MVP1P40959 511 aaKnown RBP16.11■□□□□ 0.17
TRN1tP(UGG)A MIC19P43594 170 aa16.11■□□□□ 0.17
TRN1tP(UGG)A RPN4Q03465 531 aa16.11■□□□□ 0.17
TRN1tP(UGG)A ADI1Q03677 179 aa16.11■□□□□ 0.17
TRN1tP(UGG)A RTN1Q04947 295 aaKnown RBP16.11■□□□□ 0.17
TRN1tP(UGG)A AI5_ALPHAQ9ZZX1 630 aa16.11■□□□□ 0.17
TRN1tP(UGG)A KEX2P13134 814 aa16.1■□□□□ 0.17
TRN1tP(UGG)A BET2P20133 325 aa16.1■□□□□ 0.17
TRN1tP(UGG)A PLC1P32383 869 aa16.1■□□□□ 0.17
TRN1tP(UGG)A LAS1P36146 502 aaPredicted RBP16.1■□□□□ 0.17
TRN1tP(UGG)A VAC8P39968 578 aa16.1■□□□□ 0.17
TRN1tP(UGG)A UBP7P40453 1071 aa16.1■□□□□ 0.17
TRN1tP(UGG)A NRD1P53617 575 aaKnown RBP RIP-Chip data16.1■□□□□ 0.17not detected
TRN1tP(UGG)A INP2Q03824 705 aa16.1■□□□□ 0.17
TRN1tP(UGG)A SEG1Q04279 960 aa16.1■□□□□ 0.17
TRN1tP(UGG)A CDC73Q06697 393 aa16.1■□□□□ 0.17
TRN1tP(UGG)A AAD15Q08361 143 aa16.1■□□□□ 0.17
TRN1tP(UGG)A QCR6P00127 147 aa16.09■□□□□ 0.17
TRN1tP(UGG)A GCR1P07261 785 aa16.09■□□□□ 0.17
TRN1tP(UGG)A IMG2P25642 146 aaPredicted RBP16.09■□□□□ 0.17
TRN1tP(UGG)A POL12P38121 705 aaPredicted RBP16.09■□□□□ 0.17
TRN1tP(UGG)A SPP381P38282 291 aaPredicted RBP16.09■□□□□ 0.17
TRN1tP(UGG)A TUB4P53378 473 aa16.09■□□□□ 0.17
TRN1tP(UGG)A AFI1Q99222 893 aa16.09■□□□□ 0.17
TRN1tP(UGG)A HSF1P10961 833 aa16.08■□□□□ 0.16
TRN1tP(UGG)A PPZ1P26570 692 aa16.08■□□□□ 0.16
TRN1tP(UGG)A FUI1P38196 639 aa16.08■□□□□ 0.16
TRN1tP(UGG)A YBP1P38315 674 aa16.08■□□□□ 0.16
TRN1tP(UGG)A YCS4Q06156 1176 aa16.08■□□□□ 0.16
TRN1tP(UGG)A NRT1Q08485 598 aa16.08■□□□□ 0.16
TRN1tP(UGG)A PDH1Q12428 516 aaKnown RBP16.08■□□□□ 0.16
TRN1tP(UGG)A AVL9Q12500 764 aa16.08■□□□□ 0.16
TRN1tP(UGG)A MRS6P32864 603 aaKnown RBP16.07■□□□□ 0.16
TRN1tP(UGG)A YKL097CP34245 136 aa16.07■□□□□ 0.16
TRN1tP(UGG)A SRP68P38687 599 aaKnown RBP16.07■□□□□ 0.16
TRN1tP(UGG)A MED6P38782 295 aa16.07■□□□□ 0.16
TRN1tP(UGG)A SCC4P40090 624 aa16.07■□□□□ 0.16
TRN1tP(UGG)A INA22P40576 216 aa16.07■□□□□ 0.16
TRN1tP(UGG)A TRF5P48561 642 aaKnown RBP16.07■□□□□ 0.16
TRN1tP(UGG)A YHM2Q04013 314 aa16.07■□□□□ 0.16
TRN1tP(UGG)A SWC7Q06707 132 aa16.07■□□□□ 0.16
TRN1tP(UGG)A CBF1P17106 351 aa16.06■□□□□ 0.16
TRN1tP(UGG)A NFU1P32860 256 aa16.06■□□□□ 0.16
TRN1tP(UGG)A ADD66P36040 267 aa16.06■□□□□ 0.16
TRN1tP(UGG)A YPL014WQ02606 381 aa16.06■□□□□ 0.16
TRN1tP(UGG)A YLR012CQ07927 99 aa16.06■□□□□ 0.16
TRN1tP(UGG)A PEP5P12868 1029 aa16.05■□□□□ 0.16
TRN1tP(UGG)A SGF29P25554 259 aa16.05■□□□□ 0.16
TRN1tP(UGG)A YMR206WQ03695 313 aa16.05■□□□□ 0.16
TRN1tP(UGG)A ENT5Q03769 411 aaKnown RBP16.05■□□□□ 0.16
TRN1tP(UGG)A YMR160WQ03823 816 aa16.05■□□□□ 0.16
TRN1tP(UGG)A RAD59Q12223 238 aa16.05■□□□□ 0.16
TRN1tP(UGG)A CMD1P06787 147 aaKnown RBP16.04■□□□□ 0.16
TRN1tP(UGG)A TPS2P31688 896 aaKnown RBP16.04■□□□□ 0.16
TRN1tP(UGG)A PTC3P34221 468 aaKnown RBP16.04■□□□□ 0.16
TRN1tP(UGG)A YAT2P40017 923 aa16.04■□□□□ 0.16
TRN1tP(UGG)A KTR7P40504 517 aa16.04■□□□□ 0.16
TRN1tP(UGG)A CHS6P40955 746 aa16.04■□□□□ 0.16
TRN1tP(UGG)A ROK1P45818 564 aaPredicted RBP16.04■□□□□ 0.16
TRN1tP(UGG)A DLD2P46681 530 aaKnown RBP16.04■□□□□ 0.16
TRN1tP(UGG)A ASN2P49090 572 aaKnown RBP16.04■□□□□ 0.16
TRN1tP(UGG)A MAP1Q01662 387 aaKnown RBP RIP-Chip data16.04■□□□□ 0.16not detected
TRN1tP(UGG)A PNP1Q05788 311 aa16.04■□□□□ 0.16
TRN1tP(UGG)A PEX15Q08215 383 aa16.04■□□□□ 0.16
TRN1tP(UGG)A MIS1P09440 975 aaKnown RBP16.03■□□□□ 0.16
TRN1tP(UGG)A IMA3P0CW40 589 aa16.03■□□□□ 0.16
TRN1tP(UGG)A IMA4P0CW41 589 aa16.03■□□□□ 0.16
TRN1tP(UGG)A PUP3P25451 205 aaKnown RBP16.03■□□□□ 0.16
TRN1tP(UGG)A UTR2P32623 467 aa16.03■□□□□ 0.16
TRN1tP(UGG)A RPC37P36121 282 aa16.03■□□□□ 0.16
TRN1tP(UGG)A PCL10P53124 433 aa16.03■□□□□ 0.16
TRN1tP(UGG)A YNR063WP53749 607 aa16.03■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms