RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	CKA2	P19454	339 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	BRR2	P32639	2163 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	PDR3	P33200	976 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	TSA1	P34760	196 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	TCD2	P36101	447 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	PET10	P36139	283 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	YBR056W	P38081	501 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	ALG3	P38179	458 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	SPF1	P39986	1215 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	TIM54	P47045	478 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	CUE3	P53137	624 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	TOF1	P53840	1238 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SPN1	YPR133C	SEC5	P89102	971 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	TDA5	Q06417	326 aa	Known RBP	4.59	□□□□□ -1.67
SPN1	YPR133C	CUR1	Q06469	252 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	YDL057W	Q07379	328 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	DCS2	Q12123	353 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	NBL1	Q3E7Y6	73 aa		4.59	□□□□□ -1.67
SPN1	YPR133C	GCN1	P33892	2672 aa	Known RBP	4.59	□□□□□ -1.68
SPN1	YPR133C	HSP82	P02829	709 aa	Known RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	PHO8	P11491	566 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	SAM35	P14693	329 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	ISY1	P21374	235 aa	Predicted RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	MKK2	P32491	506 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	DUT1	P33317	147 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	UBP13	P38187	747 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	TIF5	P38431	405 aa	Known RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	YHR020W	P38708	688 aa	Known RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	YHL017W	P38745	532 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	PTC7	P38797	343 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	EIS1	Q05050	843 aa	Known RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	RTT10	Q08924	1013 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	TAF10	Q12030	206 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	SGT2	Q12118	346 aa	Known RBP	4.58	□□□□□ -1.68
SPN1	YPR133C	YLR125W	Q12138	136 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	NDJ1	Q12366	352 aa		4.58	□□□□□ -1.68
SPN1	YPR133C	PRI2	P20457	528 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	GAC1	P28006	793 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	YSC84	P32793	468 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	STE5	P32917	917 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	CSE1	P33307	960 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	HSP78	P33416	811 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	AGP2	P38090	596 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	GGA2	P38817	585 aa	Known RBP	4.57	□□□□□ -1.68
SPN1	YPR133C	PMC1	P38929	1173 aa	Predicted RBP	4.57	□□□□□ -1.68
SPN1	YPR133C	YEN1	P40028	759 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	THI6	P41835	540 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	UBA2	P52488	636 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	YGR053C	P53234	283 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	RTC4	P53850	401 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	ORC3	P54790	616 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	YAT1	P80235	687 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	WAR1	Q03631	944 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	PRM6	Q04705	352 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	OPI10	Q08202	246 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	GPM2	Q12008	311 aa		4.57	□□□□□ -1.68
SPN1	YPR133C	POL2	P21951	2222 aa	Known RBP	4.57	□□□□□ -1.68
SPN1	YPR133C	HSF1	P10961	833 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	FPR1	P20081	114 aa	Known RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	KIN3	P22209	435 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	SYP1	P25623	870 aa	Known RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	TKL2	P33315	681 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	YKL069W	P36088	180 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	UTH1	P36135	365 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	PPS1	P38148	807 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	SHE3	P38272	425 aa	Known RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SPN1	YPR133C	NUP60	P39705	539 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	NPP2	P39997	493 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	GTS1	P40956	396 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	ECL1	P48235	211 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	HSH155	P49955	971 aa	Known RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	CEG1	Q01159	459 aa	Predicted RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	LPX1	Q12405	387 aa	Known RBP	4.56	□□□□□ -1.68
SPN1	YPR133C	DFG16	Q99234	619 aa		4.56	□□□□□ -1.68
SPN1	YPR133C	PRP8	P33334	2413 aa	Known RBP	4.55	□□□□□ -1.68
SPN1	YPR133C	FOB1	O13329	566 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	REV1	P12689	985 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	TFB1	P32776	642 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	SAP190	P36123	1033 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	YIL161W	P40449	235 aa	Known RBP	4.55	□□□□□ -1.68
SPN1	YPR133C	CNN1	P43618	361 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	CTF18	P49956	741 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	TYW3	P53177	273 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	GCN5	Q03330	439 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	SEG1	Q04279	960 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	YPL277C	Q08989	487 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	TMA46	Q12000	345 aa	Known RBP	4.55	□□□□□ -1.68
SPN1	YPR133C	SPO21	Q12411	609 aa		4.55	□□□□□ -1.68
SPN1	YPR133C	CHS1	P08004	1131 aa		4.54	□□□□□ -1.68
SPN1	YPR133C	MUD1	P32605	298 aa	Known RBP	4.54	□□□□□ -1.68
SPN1	YPR133C	LRG1	P35688	1017 aa		4.54	□□□□□ -1.68
SPN1	YPR133C	KDX1	P36005	433 aa		4.54	□□□□□ -1.68
SPN1	YPR133C	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
SPN1	YPR133C	YBR225W	P38321	900 aa		4.54	□□□□□ -1.68
SPN1	YPR133C	CRP1	P38845	465 aa	Known RBP	4.54	□□□□□ -1.68
SPN1	YPR133C	ERG10	P41338	398 aa	Known RBP	4.54	□□□□□ -1.68
SPN1	YPR133C	DAS1	P47005	663 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms