RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W RAD1P06777 1100 aa3.99□□□□□ -1.77
ROD1YOR018W ADE3P07245 946 aaKnown RBP3.99□□□□□ -1.77
ROD1YOR018W MLF3P32047 452 aa3.99□□□□□ -1.77
ROD1YOR018W POA1P38218 177 aa3.99□□□□□ -1.77
ROD1YOR018W VHC1P38329 1120 aa3.99□□□□□ -1.77
ROD1YOR018W YMR134WP40207 237 aa3.99□□□□□ -1.77
ROD1YOR018W AIR1P40507 360 aaKnown RBP3.99□□□□□ -1.77
ROD1YOR018W YFL012WP43580 148 aa3.99□□□□□ -1.77
ROD1YOR018W YGR035CP53222 116 aa3.99□□□□□ -1.77
ROD1YOR018W KTR6P54070 446 aa3.99□□□□□ -1.77
ROD1YOR018W RNY1Q02933 434 aaKnown RBP3.99□□□□□ -1.77
ROD1YOR018W GCN5Q03330 439 aa3.99□□□□□ -1.77
ROD1YOR018W TAF9Q05027 157 aa3.99□□□□□ -1.77
ROD1YOR018W NBP2Q12163 236 aa3.99□□□□□ -1.77
ROD1YOR018W YDR034W-BQ6Q5X2 51 aa3.99□□□□□ -1.77
ROD1YOR018W YLR422WQ06409 1932 aa3.99□□□□□ -1.77
ROD1YOR018W PYC1P11154 1178 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W CDC24P11433 854 aaPredicted RBP3.98□□□□□ -1.77
ROD1YOR018W SFL1P20134 766 aa3.98□□□□□ -1.77
ROD1YOR018W PDE1P22434 369 aa3.98□□□□□ -1.77
ROD1YOR018W ABD1P32783 436 aaPredicted RBP3.98□□□□□ -1.77
ROD1YOR018W TKL2P33315 681 aa3.98□□□□□ -1.77
ROD1YOR018W SCD5P34758 872 aa3.98□□□□□ -1.77
ROD1YOR018W TIF5P38431 405 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W URA8P38627 578 aaPredicted RBP3.98□□□□□ -1.77
ROD1YOR018W YHR202WP38887 602 aa3.98□□□□□ -1.77
ROD1YOR018W JHD1P40034 492 aa3.98□□□□□ -1.77
ROD1YOR018W RRT5P43607 289 aa3.98□□□□□ -1.77
ROD1YOR018W YML6P51998 286 aa3.98□□□□□ -1.77
ROD1YOR018W SUT1P53032 299 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W NUT1P53114 1132 aa3.98□□□□□ -1.77
ROD1YOR018W YGR127WP53275 312 aa3.98□□□□□ -1.77
ROD1YOR018W TEP1P53916 434 aa3.98□□□□□ -1.77
ROD1YOR018W UTP6Q02354 440 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W YPL062WQ02781 134 aa3.98□□□□□ -1.77
ROD1YOR018W FMP25Q08023 583 aa3.98□□□□□ -1.77
ROD1YOR018W BDS1Q08347 646 aa3.98□□□□□ -1.77
ROD1YOR018W YOR223WQ12015 292 aa3.98□□□□□ -1.77
ROD1YOR018W AHC1Q12433 566 aa3.98□□□□□ -1.77
ROD1YOR018W NOP58Q12499 511 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W Q0182Q9ZZW1 134 aa3.98□□□□□ -1.77
ROD1YOR018W RAS1P01119 309 aa3.98□□□□□ -1.77
ROD1YOR018W CMD1P06787 147 aaKnown RBP3.98□□□□□ -1.77
ROD1YOR018W MAS1P10507 462 aa3.98□□□□□ -1.77
ROD1YOR018W URK1P27515 501 aa3.98□□□□□ -1.77
ROD1YOR018W DAL1P32375 460 aa3.98□□□□□ -1.77
ROD1YOR018W LTV1P34078 463 aa3.98□□□□□ -1.77
ROD1YOR018W BYE1P36106 594 aa3.98□□□□□ -1.77
ROD1YOR018W YMC2P38087 329 aa3.98□□□□□ -1.77
ROD1YOR018W DUG2P38149 878 aa3.98□□□□□ -1.77
ROD1YOR018W SWC5P38326 303 aa3.98□□□□□ -1.77
ROD1YOR018W ATM1P40416 690 aa3.98□□□□□ -1.77
ROD1YOR018W VTC4P47075 721 aa3.98□□□□□ -1.77
ROD1YOR018W YGR130CP53278 816 aa3.98□□□□□ -1.77
ROD1YOR018W MAL13P53338 473 aa3.98□□□□□ -1.77
ROD1YOR018W RPN4Q03465 531 aa3.98□□□□□ -1.77
ROD1YOR018W USA1Q03714 838 aa3.98□□□□□ -1.77
ROD1YOR018W RKM2Q03942 479 aa3.98□□□□□ -1.77
ROD1YOR018W THI20Q08224 551 aa3.98□□□□□ -1.77
ROD1YOR018W YOR387CQ08910 206 aa3.98□□□□□ -1.77
ROD1YOR018W LEA1Q08963 238 aaPredicted RBP3.98□□□□□ -1.77
ROD1YOR018W HAP2P06774 265 aa3.97□□□□□ -1.77
ROD1YOR018W MSD1P15179 658 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W PUT4P15380 627 aa3.97□□□□□ -1.77
ROD1YOR018W SLY1P22213 666 aa3.97□□□□□ -1.77
ROD1YOR018W AMS1P22855 1083 aa3.97□□□□□ -1.77
ROD1YOR018W CDC20P26309 610 aa3.97□□□□□ -1.77
ROD1YOR018W TPS2P31688 896 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W YEL043WP32618 956 aa3.97□□□□□ -1.77
ROD1YOR018W MAC1P35192 417 aa3.97□□□□□ -1.77
ROD1YOR018W RGD1P38339 666 aa3.97□□□□□ -1.77
ROD1YOR018W PCA1P38360 1216 aa3.97□□□□□ -1.77
ROD1YOR018W CCT2P39076 527 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W MAD1P40957 749 aa3.97□□□□□ -1.77
ROD1YOR018W GUF1P46943 645 aa3.97□□□□□ -1.77
ROD1YOR018W TIM13P53299 105 aa3.97□□□□□ -1.77
ROD1YOR018W TRM112P53738 135 aaPredicted RBP3.97□□□□□ -1.77
ROD1YOR018W MTG1Q03151 367 aaPredicted RBP3.97□□□□□ -1.77
ROD1YOR018W SKY1Q03656 742 aa3.97□□□□□ -1.77
ROD1YOR018W KAP95Q06142 861 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W NOP6Q07623 225 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W APL5Q08951 932 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W NUR1Q12066 484 aa3.97□□□□□ -1.77
ROD1YOR018W UBR2Q07963 1872 aa3.97□□□□□ -1.77
ROD1YOR018W CDC8P00572 216 aa3.97□□□□□ -1.77
ROD1YOR018W SPE1P08432 466 aa3.97□□□□□ -1.77
ROD1YOR018W TUB3P09734 445 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W MSN1P22148 382 aa3.97□□□□□ -1.77
ROD1YOR018W HSP78P33416 811 aa3.97□□□□□ -1.77
ROD1YOR018W MGE1P38523 228 aa3.97□□□□□ -1.77
ROD1YOR018W FAA3P39002 694 aa3.97□□□□□ -1.77
ROD1YOR018W FHL1P39521 936 aa3.97□□□□□ -1.77
ROD1YOR018W SPC72P39723 622 aa3.97□□□□□ -1.77
ROD1YOR018W STL1P39932 569 aa3.97□□□□□ -1.77
ROD1YOR018W SMX2P40204 77 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W ALA1P40825 983 aaKnown RBP3.97□□□□□ -1.77
ROD1YOR018W NRD1P53617 575 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
ROD1YOR018W NOP13P53883 403 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
ROD1YOR018W THI21Q08975 551 aa3.97□□□□□ -1.77
ROD1YOR018W LCB4Q12246 624 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms