RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ERR2P0CX11 437 aa8.81□□□□□ -1
RPD3YNL330C TAL1P15019 335 aaKnown RBP8.81□□□□□ -1
RPD3YNL330C MSD1P15179 658 aaKnown RBP8.81□□□□□ -1
RPD3YNL330C URA4P20051 364 aa8.81□□□□□ -1
RPD3YNL330C SAT4P25333 603 aaKnown RBP8.81□□□□□ -1
RPD3YNL330C YUR1P26725 428 aa8.81□□□□□ -1
RPD3YNL330C HXT3P32466 567 aaKnown RBP8.81□□□□□ -1
RPD3YNL330C CYM1P32898 989 aa8.81□□□□□ -1
RPD3YNL330C PEX5P35056 612 aa8.81□□□□□ -1
RPD3YNL330C AST1P35183 429 aa8.81□□□□□ -1
RPD3YNL330C ABZ1P37254 787 aaPredicted RBP8.81□□□□□ -1
RPD3YNL330C CTP1P38152 299 aa8.81□□□□□ -1
RPD3YNL330C TDA11P38854 504 aa8.81□□□□□ -1
RPD3YNL330C ERR3P42222 437 aa8.81□□□□□ -1
RPD3YNL330C SAD1P43589 448 aa8.81□□□□□ -1
RPD3YNL330C ASG7P46993 209 aa8.81□□□□□ -1
RPD3YNL330C ISM1P48526 1002 aa8.81□□□□□ -1
RPD3YNL330C HST2P53686 357 aa8.81□□□□□ -1
RPD3YNL330C ULP1Q02724 621 aa8.81□□□□□ -1
RPD3YNL330C RPM2Q02773 1202 aa8.81□□□□□ -1
RPD3YNL330C YDR476CQ03362 224 aa8.81□□□□□ -1
RPD3YNL330C SND1Q04007 877 aa8.81□□□□□ -1
RPD3YNL330C YDL073WQ07454 984 aa8.81□□□□□ -1
RPD3YNL330C THI20Q08224 551 aa8.81□□□□□ -1
RPD3YNL330C YDR461C-AQ2V2P7 80 aa8.81□□□□□ -1
RPD3YNL330C RGS2Q99188 309 aa8.81□□□□□ -1
RPD3YNL330C AI5_ALPHAQ9ZZX1 630 aa8.81□□□□□ -1
RPD3YNL330C MOT1P32333 1867 aa8.81□□□□□ -1
RPD3YNL330C ENO2P00925 437 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C COX4P04037 155 aa8.8□□□□□ -1
RPD3YNL330C PAB1P04147 577 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
RPD3YNL330C PDC5P16467 563 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C PRP6P19735 899 aaPredicted RBP8.8□□□□□ -1
RPD3YNL330C HSP60P19882 572 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C HRR25P29295 494 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C RIM1P32445 135 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C SPR1P32603 445 aa8.8□□□□□ -1
RPD3YNL330C RDH54P38086 958 aa8.8□□□□□ -1
RPD3YNL330C HSL7P38274 827 aa8.8□□□□□ -1
RPD3YNL330C PHO89P38361 574 aa8.8□□□□□ -1
RPD3YNL330C OTU2P38747 307 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C CRP1P38845 465 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C AIM18P38884 321 aa8.8□□□□□ -1
RPD3YNL330C YDR089WP38966 869 aa8.8□□□□□ -1
RPD3YNL330C AVT2P39981 480 aa8.8□□□□□ -1
RPD3YNL330C DSE1P40077 573 aa8.8□□□□□ -1
RPD3YNL330C CHS6P40955 746 aa8.8□□□□□ -1
RPD3YNL330C NUP84P52891 726 aa8.8□□□□□ -1
RPD3YNL330C TEL2P53038 688 aa8.8□□□□□ -1
RPD3YNL330C NMA2P53204 395 aa8.8□□□□□ -1
RPD3YNL330C IST1P53843 298 aaPredicted RBP8.8□□□□□ -1
RPD3YNL330C NOP13P53883 403 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
RPD3YNL330C YMR209CQ03648 457 aa8.8□□□□□ -1
RPD3YNL330C YML020WQ03722 664 aa8.8□□□□□ -1
RPD3YNL330C NRT1Q08485 598 aa8.8□□□□□ -1
RPD3YNL330C HRT3Q12347 344 aa8.8□□□□□ -1
RPD3YNL330C YAK1P14680 807 aa8.8□□□□□ -1
RPD3YNL330C GID7P25569 745 aa8.8□□□□□ -1
RPD3YNL330C PHA2P32452 334 aa8.8□□□□□ -1
RPD3YNL330C KDX1P36005 433 aa8.8□□□□□ -1
RPD3YNL330C YKR078WP36158 585 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C TBS1P38114 1094 aa8.8□□□□□ -1
RPD3YNL330C MNN11P46985 422 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C YGR016WP53209 190 aa8.8□□□□□ -1
RPD3YNL330C UTP8P53276 713 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C ALG11P53954 548 aaKnown RBP8.8□□□□□ -1
RPD3YNL330C YMR160WQ03823 816 aa8.8□□□□□ -1
RPD3YNL330C CDD1Q06549 142 aa8.8□□□□□ -1
RPD3YNL330C TY3A-GQ12173 290 aa8.8□□□□□ -1
RPD3YNL330C TY3A-IQ99219 290 aa8.8□□□□□ -1
RPD3YNL330C MAS2P11914 482 aa8.79□□□□□ -1
RPD3YNL330C GCY1P14065 312 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
RPD3YNL330C GLN3P18494 730 aa8.79□□□□□ -1
RPD3YNL330C MSB1P21339 1137 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C LRE1P25579 583 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C VPH2P32341 215 aa8.79□□□□□ -1
RPD3YNL330C RGT1P32862 1170 aa8.79□□□□□ -1
RPD3YNL330C FLR1P38124 548 aa8.79□□□□□ -1
RPD3YNL330C BEM4P39011 633 aa8.79□□□□□ -1
RPD3YNL330C MAM33P40513 266 aa8.79□□□□□ -1
RPD3YNL330C CCT7P42943 550 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C PFD1P46988 109 aa8.79□□□□□ -1
RPD3YNL330C VTC4P47075 721 aa8.79□□□□□ -1
RPD3YNL330C VMA10P48836 114 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C COG2P53271 262 aa8.79□□□□□ -1
RPD3YNL330C VPS9P54787 451 aa8.79□□□□□ -1
RPD3YNL330C TMA46Q12000 345 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C SPE3Q12074 293 aaKnown RBP8.79□□□□□ -1
RPD3YNL330C STB3Q12427 513 aa8.79□□□□□ -1
RPD3YNL330C CTF3Q12748 733 aa8.79□□□□□ -1
RPD3YNL330C FRE1P32791 686 aa8.78□□□□□ -1
RPD3YNL330C RPT1P33299 467 aaKnown RBP8.78□□□□□ -1
RPD3YNL330C AGP2P38090 596 aa8.78□□□□□ -1
RPD3YNL330C BZZ1P38822 633 aa8.78□□□□□ -1
RPD3YNL330C PDS1P40316 373 aaPredicted RBP8.78□□□□□ -1
RPD3YNL330C RRN7P40992 514 aa8.78□□□□□ -1
RPD3YNL330C YFL012WP43580 148 aa8.78□□□□□ -1
RPD3YNL330C RRT5P43607 289 aa8.78□□□□□ -1
RPD3YNL330C PEX31P53203 462 aa8.78□□□□□ -1
RPD3YNL330C SLU7Q02775 382 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms