RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C MRP7P12687 371 aa3.39□□□□□ -1.87
SQS1YNL224C UNG1P12887 359 aa3.39□□□□□ -1.87
SQS1YNL224C PRP2P20095 876 aaPredicted RBP3.39□□□□□ -1.87
SQS1YNL224C IMG2P25642 146 aaPredicted RBP3.39□□□□□ -1.87
SQS1YNL224C RPS7AP26786 190 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C SSO1P32867 290 aa3.39□□□□□ -1.87
SQS1YNL224C KTR2P33550 425 aa3.39□□□□□ -1.87
SQS1YNL224C GPT2P36148 743 aa3.39□□□□□ -1.87
SQS1YNL224C SEA4P38164 1038 aa3.39□□□□□ -1.87
SQS1YNL224C RFC5P38251 354 aa3.39□□□□□ -1.87
SQS1YNL224C SEC31P38968 1273 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C JLP2P40206 208 aa3.39□□□□□ -1.87
SQS1YNL224C MSS2P40990 351 aa3.39□□□□□ -1.87
SQS1YNL224C STB1P42845 420 aa3.39□□□□□ -1.87
SQS1YNL224C LOH1P47055 219 aa3.39□□□□□ -1.87
SQS1YNL224C TIM21P53220 239 aa3.39□□□□□ -1.87
SQS1YNL224C YNR063WP53749 607 aa3.39□□□□□ -1.87
SQS1YNL224C RNY1Q02933 434 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C NGL3Q03210 505 aa3.39□□□□□ -1.87
SQS1YNL224C YDR514CQ04408 483 aa3.39□□□□□ -1.87
SQS1YNL224C GTB1Q04924 702 aa3.39□□□□□ -1.87
SQS1YNL224C BOP2Q06150 570 aa3.39□□□□□ -1.87
SQS1YNL224C FLC1Q08967 793 aa3.39□□□□□ -1.87
SQS1YNL224C ICL2Q12031 575 aa3.39□□□□□ -1.87
SQS1YNL224C TGL5Q12043 749 aa3.39□□□□□ -1.87
SQS1YNL224C GPR1Q12361 961 aa3.39□□□□□ -1.87
SQS1YNL224C RAD61Q99359 647 aa3.39□□□□□ -1.87
SQS1YNL224C MYO4P32492 1471 aa3.38□□□□□ -1.87
SQS1YNL224C ENO2P00925 437 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C PAB1P04147 577 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SQS1YNL224C SRS2P12954 1174 aa3.38□□□□□ -1.87
SQS1YNL224C PCT1P13259 424 aa3.38□□□□□ -1.87
SQS1YNL224C URE2P23202 354 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C YCR101CP25607 182 aa3.38□□□□□ -1.87
SQS1YNL224C ZIP1P31111 875 aa3.38□□□□□ -1.87
SQS1YNL224C MDL1P33310 695 aa3.38□□□□□ -1.87
SQS1YNL224C PIC2P40035 300 aa3.38□□□□□ -1.87
SQS1YNL224C NTA1P40354 457 aa3.38□□□□□ -1.87
SQS1YNL224C IRC24P40580 263 aa3.38□□□□□ -1.87
SQS1YNL224C COX16P47081 118 aa3.38□□□□□ -1.87
SQS1YNL224C RBL2P48606 106 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C BIO3P50277 480 aa3.38□□□□□ -1.87
SQS1YNL224C SEH1P53011 349 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C CAF120P53836 1060 aa3.38□□□□□ -1.87
SQS1YNL224C HEF3P53978 1044 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C PEX25Q02969 394 aa3.38□□□□□ -1.87
SQS1YNL224C UTP5Q04177 643 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C VBA4Q04602 768 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C COX20Q04935 205 aa3.38□□□□□ -1.87
SQS1YNL224C YLR173WQ06247 608 aa3.38□□□□□ -1.87
SQS1YNL224C TOS4Q06266 489 aa3.38□□□□□ -1.87
SQS1YNL224C DTD1Q07648 150 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C THI73Q07904 523 aa3.38□□□□□ -1.87
SQS1YNL224C DIA2Q08496 732 aaPredicted RBP3.38□□□□□ -1.87
SQS1YNL224C LEU9Q12166 604 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C TIP41Q12199 356 aa3.38□□□□□ -1.87
SQS1YNL224C HMS1Q12398 434 aa3.38□□□□□ -1.87
SQS1YNL224C SKS1Q12505 502 aa3.38□□□□□ -1.87
SQS1YNL224C TUS1Q06412 1307 aa3.38□□□□□ -1.87
SQS1YNL224C RPO31P04051 1460 aa3.38□□□□□ -1.87
SQS1YNL224C COX11P19516 300 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C VMA6P32366 345 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C LOT5P34234 306 aa3.38□□□□□ -1.87
SQS1YNL224C OCT1P35999 772 aa3.38□□□□□ -1.87
SQS1YNL224C HEL1P36113 551 aa3.38□□□□□ -1.87
SQS1YNL224C PGM2P37012 569 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C AKL1P38080 1108 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C YHR182WP38870 785 aa3.38□□□□□ -1.87
SQS1YNL224C YER184CP39961 794 aa3.38□□□□□ -1.87
SQS1YNL224C ACA1P39970 489 aa3.38□□□□□ -1.87
SQS1YNL224C RGI2P40188 164 aa3.38□□□□□ -1.87
SQS1YNL224C ERG10P41338 398 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C RSM26P47141 266 aa3.38□□□□□ -1.87
SQS1YNL224C YDL183CP48569 320 aa3.38□□□□□ -1.87
SQS1YNL224C FMS1P50264 508 aa3.38□□□□□ -1.87
SQS1YNL224C LCL3P53153 274 aa3.38□□□□□ -1.87
SQS1YNL224C CPR6P53691 371 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C BRE5P53741 515 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C UFD2P54860 961 aa3.38□□□□□ -1.87
SQS1YNL224C YDC1Q02896 317 aa3.38□□□□□ -1.87
SQS1YNL224C CLU1Q03690 1277 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C YMR155WQ03795 547 aa3.38□□□□□ -1.87
SQS1YNL224C FIN1Q03898 291 aa3.38□□□□□ -1.87
SQS1YNL224C HED1Q03937 162 aa3.38□□□□□ -1.87
SQS1YNL224C DFG5Q05031 458 aa3.38□□□□□ -1.87
SQS1YNL224C RSA3Q05942 220 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C LCB5Q06147 687 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C MCM21Q06675 368 aa3.38□□□□□ -1.87
SQS1YNL224C YLL007CQ07799 665 aa3.38□□□□□ -1.87
SQS1YNL224C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SQS1YNL224C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SQS1YNL224C RVB2Q12464 471 aaKnown RBP3.38□□□□□ -1.87
SQS1YNL224C RAD9P14737 1309 aa3.38□□□□□ -1.87
SQS1YNL224C TUB2P02557 457 aaKnown RBP3.37□□□□□ -1.87
SQS1YNL224C HTA1P04911 132 aaKnown RBP3.37□□□□□ -1.87
SQS1YNL224C HTA2P04912 132 aa3.37□□□□□ -1.87
SQS1YNL224C ARG3P05150 338 aa3.37□□□□□ -1.87
SQS1YNL224C CBP6P07253 162 aaPredicted RBP3.37□□□□□ -1.87
SQS1YNL224C GPA2P10823 449 aa3.37□□□□□ -1.87
SQS1YNL224C APE1P14904 514 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms