RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C ALT2P52892 507 aa5.26□□□□□ -1.57
CCS1YMR038C YGL081WP53156 320 aa5.26□□□□□ -1.57
CCS1YMR038C MDR1P53258 950 aa5.26□□□□□ -1.57
CCS1YMR038C SGO1Q08490 590 aa5.26□□□□□ -1.57
CCS1YMR038C RRD2Q12461 358 aa5.26□□□□□ -1.57
CCS1YMR038C ARP6Q12509 438 aa5.26□□□□□ -1.57
CCS1YMR038C DIF1O13577 133 aa5.25□□□□□ -1.57
CCS1YMR038C TUB3P09734 445 aaKnown RBP5.25□□□□□ -1.57
CCS1YMR038C PRP4P20053 465 aaKnown RBP5.25□□□□□ -1.57
CCS1YMR038C PEP3P27801 918 aa5.25□□□□□ -1.57
CCS1YMR038C DCG1P32460 244 aa5.25□□□□□ -1.57
CCS1YMR038C MRPL7P36519 292 aa5.25□□□□□ -1.57
CCS1YMR038C GIP4P39732 760 aa5.25□□□□□ -1.57
CCS1YMR038C ALY2P47029 1046 aa5.25□□□□□ -1.57
CCS1YMR038C GUP2Q08929 609 aa5.25□□□□□ -1.57
CCS1YMR038C NOP14Q99207 810 aaKnown RBP5.25□□□□□ -1.57
CCS1YMR038C RNR3P21672 869 aaKnown RBP5.24□□□□□ -1.57
CCS1YMR038C HCM1P25364 564 aa5.24□□□□□ -1.57
CCS1YMR038C YCR015CP25616 317 aa5.24□□□□□ -1.57
CCS1YMR038C YKL097CP34245 136 aa5.24□□□□□ -1.57
CCS1YMR038C ARP1P38696 384 aa5.24□□□□□ -1.57
CCS1YMR038C YEL025CP39991 1188 aa5.24□□□□□ -1.57
CCS1YMR038C ORC4P54791 529 aa5.24□□□□□ -1.57
CCS1YMR038C MUK1Q02866 612 aa5.24□□□□□ -1.57
CCS1YMR038C TFB2Q02939 513 aa5.24□□□□□ -1.57
CCS1YMR038C YLR001CQ07895 862 aa5.24□□□□□ -1.57
CCS1YMR038C RAD50P12753 1312 aa5.23□□□□□ -1.57
CCS1YMR038C MIH1P23748 554 aa5.23□□□□□ -1.57
CCS1YMR038C PCL2P25693 308 aa5.23□□□□□ -1.57
CCS1YMR038C RFS1P38234 210 aaKnown RBP5.23□□□□□ -1.57
CCS1YMR038C ESL1P40456 1118 aa5.23□□□□□ -1.57
CCS1YMR038C YIR016WP40572 265 aa5.23□□□□□ -1.57
CCS1YMR038C SHR5P41912 237 aa5.23□□□□□ -1.57
CCS1YMR038C YFL052WP43551 465 aa5.23□□□□□ -1.57
CCS1YMR038C SSY5P47002 699 aa5.23□□□□□ -1.57
CCS1YMR038C PHO23P50947 330 aa5.23□□□□□ -1.57
CCS1YMR038C YNL134CP53912 376 aaKnown RBP5.23□□□□□ -1.57
CCS1YMR038C SNP1Q00916 300 aaPredicted RBP5.23□□□□□ -1.57
CCS1YMR038C YDR341CQ05506 607 aaKnown RBP5.23□□□□□ -1.57
CCS1YMR038C SMD2Q06217 110 aaKnown RBP5.23□□□□□ -1.57
CCS1YMR038C CRD1Q07560 283 aa5.23□□□□□ -1.57
CCS1YMR038C ENB1Q08299 606 aa5.23□□□□□ -1.57
CCS1YMR038C GPR1Q12361 961 aa5.23□□□□□ -1.57
CCS1YMR038C YLR422WQ06409 1932 aa5.23□□□□□ -1.57
CCS1YMR038C APE1P14904 514 aa5.22□□□□□ -1.57
CCS1YMR038C MCM3P24279 971 aaKnown RBP5.22□□□□□ -1.57
CCS1YMR038C RME1P32338 300 aaKnown RBP5.22□□□□□ -1.57
CCS1YMR038C COY1P34237 679 aa5.22□□□□□ -1.57
CCS1YMR038C BRN1P38170 754 aa5.22□□□□□ -1.57
CCS1YMR038C VHR1P40522 640 aa5.22□□□□□ -1.57
CCS1YMR038C BUL1P48524 976 aa5.22□□□□□ -1.57
CCS1YMR038C ZIP2P53061 704 aa5.22□□□□□ -1.57
CCS1YMR038C ASI2P53895 289 aa5.22□□□□□ -1.57
CCS1YMR038C ERG5P54781 538 aa5.22□□□□□ -1.57
CCS1YMR038C MUS81Q04149 632 aaPredicted RBP5.22□□□□□ -1.57
CCS1YMR038C AIM33Q04516 312 aa5.22□□□□□ -1.57
CCS1YMR038C ASM4Q05166 528 aa5.22□□□□□ -1.57
CCS1YMR038C CRR1Q05790 422 aa5.22□□□□□ -1.57
CCS1YMR038C PEX19Q07418 342 aa5.22□□□□□ -1.57
CCS1YMR038C LAA1P39526 2014 aa5.22□□□□□ -1.57
CCS1YMR038C PEX1P24004 1043 aa5.21□□□□□ -1.58
CCS1YMR038C HOG1P32485 435 aa5.21□□□□□ -1.58
CCS1YMR038C SPC42P36094 363 aa5.21□□□□□ -1.58
CCS1YMR038C SAK1P38990 1142 aa5.21□□□□□ -1.58
CCS1YMR038C MAF1P41910 395 aa5.21□□□□□ -1.58
CCS1YMR038C ZPR1P53303 486 aaKnown RBP5.21□□□□□ -1.58
CCS1YMR038C DOS2P54858 310 aa5.21□□□□□ -1.58
CCS1YMR038C YML053CQ04978 212 aa5.21□□□□□ -1.58
CCS1YMR038C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
CCS1YMR038C SWM1Q12379 170 aa5.21□□□□□ -1.58
CCS1YMR038C AIM44Q99299 758 aa5.21□□□□□ -1.58
CCS1YMR038C PFK1P16861 987 aaKnown RBP5.2□□□□□ -1.58
CCS1YMR038C SGF29P25554 259 aa5.2□□□□□ -1.58
CCS1YMR038C CSE2P33308 149 aa5.2□□□□□ -1.58
CCS1YMR038C YEL1P34225 687 aa5.2□□□□□ -1.58
CCS1YMR038C FMO1P38866 432 aa5.2□□□□□ -1.58
CCS1YMR038C YHR202WP38887 602 aa5.2□□□□□ -1.58
CCS1YMR038C CCT3P39077 534 aaKnown RBP5.2□□□□□ -1.58
CCS1YMR038C PCI8P40512 444 aa5.2□□□□□ -1.58
CCS1YMR038C VID28P40547 921 aa5.2□□□□□ -1.58
CCS1YMR038C PFA3P42836 336 aa5.2□□□□□ -1.58
CCS1YMR038C EPL1P43572 832 aa5.2□□□□□ -1.58
CCS1YMR038C YJR142WP47173 342 aa5.2□□□□□ -1.58
CCS1YMR038C DIP5P53388 608 aa5.2□□□□□ -1.58
CCS1YMR038C MRI1Q06489 411 aaKnown RBP5.2□□□□□ -1.58
CCS1YMR038C NTO1Q12311 748 aa5.2□□□□□ -1.58
CCS1YMR038C PCD1Q12524 340 aa5.2□□□□□ -1.58
CCS1YMR038C YLR149CQ99296 730 aa5.2□□□□□ -1.58
CCS1YMR038C PGK1P00560 416 aaKnown RBP5.19□□□□□ -1.58
CCS1YMR038C ILV1P00927 576 aaKnown RBP5.19□□□□□ -1.58
CCS1YMR038C HCA4P20448 770 aaKnown RBP5.19□□□□□ -1.58
CCS1YMR038C GCS1P35197 352 aa5.19□□□□□ -1.58
CCS1YMR038C CTF13P35203 478 aa5.19□□□□□ -1.58
CCS1YMR038C YHL026CP38740 315 aa5.19□□□□□ -1.58
CCS1YMR038C RPN10P38886 268 aaKnown RBP5.19□□□□□ -1.58
CCS1YMR038C GPD2P41911 440 aaKnown RBP5.19□□□□□ -1.58
CCS1YMR038C NHX1Q04121 633 aa5.19□□□□□ -1.58
CCS1YMR038C PHM6Q05637 104 aa5.19□□□□□ -1.58
CCS1YMR038C HIF1Q12373 385 aa5.19□□□□□ -1.58
CCS1YMR038C Q0142Q9ZZW4 58 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms