RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	URN1	Q06525	465 aa	Known RBP	5	□□□□□ -1.61
VPS71	YML041C	MED1	Q12321	566 aa		5	□□□□□ -1.61
VPS71	YML041C	SUL2	Q12325	893 aa		5	□□□□□ -1.61
VPS71	YML041C	LEU2	P04173	364 aa	Predicted RBP	4.99	□□□□□ -1.61
VPS71	YML041C	CDC31	P06704	161 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	ALG7	P07286	448 aa		4.99	□□□□□ -1.61
VPS71	YML041C	GUK1	P15454	187 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	THR1	P17423	357 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	SLC1	P33333	303 aa		4.99	□□□□□ -1.61
VPS71	YML041C	GEX2	P36173	615 aa		4.99	□□□□□ -1.61
VPS71	YML041C	UBS1	P38290	277 aa		4.99	□□□□□ -1.61
VPS71	YML041C	CAB2	P40506	365 aa		4.99	□□□□□ -1.61
VPS71	YML041C	UPF3	P48412	387 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	PSP1	P50896	841 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	SNF12	P53628	566 aa		4.99	□□□□□ -1.61
VPS71	YML041C	USA1	Q03714	838 aa		4.99	□□□□□ -1.61
VPS71	YML041C	YKU80	Q04437	629 aa		4.99	□□□□□ -1.61
VPS71	YML041C	CSR1	Q06705	408 aa	Known RBP	4.99	□□□□□ -1.61
VPS71	YML041C	NTO1	Q12311	748 aa		4.99	□□□□□ -1.61
VPS71	YML041C	ERP4	Q12450	207 aa		4.99	□□□□□ -1.61
VPS71	YML041C	PCK1	P10963	549 aa		4.98	□□□□□ -1.61
VPS71	YML041C	PRE2	P30656	287 aa	Known RBP	4.98	□□□□□ -1.61
VPS71	YML041C	DSS4	P32601	143 aa		4.98	□□□□□ -1.61
VPS71	YML041C	MRPL36	P36531	177 aa		4.98	□□□□□ -1.61
VPS71	YML041C	STB5	P38699	743 aa		4.98	□□□□□ -1.61
VPS71	YML041C	REV7	P38927	245 aa		4.98	□□□□□ -1.61
VPS71	YML041C	NOP16	P40007	231 aa	Known RBP	4.98	□□□□□ -1.61
VPS71	YML041C	YER010C	P40011	234 aa		4.98	□□□□□ -1.61
VPS71	YML041C	EFR3	Q03653	782 aa	Known RBP	4.98	□□□□□ -1.61
VPS71	YML041C	VPS64	Q03944	604 aa		4.98	□□□□□ -1.61
VPS71	YML041C	YLR040C	Q07988	224 aa		4.98	□□□□□ -1.61
VPS71	YML041C	PCD1	Q12524	340 aa		4.98	□□□□□ -1.61
VPS71	YML041C	PPR1	P07272	904 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS71	YML041C	VPS34	P22543	875 aa		4.97	□□□□□ -1.61
VPS71	YML041C	CTS1	P29029	562 aa		4.97	□□□□□ -1.61
VPS71	YML041C	HRR25	P29295	494 aa	Known RBP	4.97	□□□□□ -1.61
VPS71	YML041C	MUD2	P36084	527 aa	Known RBP	4.97	□□□□□ -1.61
VPS71	YML041C	YHR097C	P38809	366 aa	Known RBP	4.97	□□□□□ -1.61
VPS71	YML041C	BUD16	P39988	312 aa		4.97	□□□□□ -1.61
VPS71	YML041C	YEL025C	P39991	1188 aa		4.97	□□□□□ -1.61
VPS71	YML041C	ARB1	P40024	610 aa	Known RBP	4.97	□□□□□ -1.61
VPS71	YML041C	SAP4	P53036	818 aa		4.97	□□□□□ -1.61
VPS71	YML041C	CSL4	P53859	292 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS71	YML041C	ARA2	Q04212	335 aa		4.97	□□□□□ -1.61
VPS71	YML041C	VAM6	Q07468	1049 aa		4.97	□□□□□ -1.61
VPS71	YML041C	YCR061W	P25639	631 aa		4.96	□□□□□ -1.62
VPS71	YML041C	FUB1	P25659	250 aa		4.96	□□□□□ -1.62
VPS71	YML041C	RPS7A	P26786	190 aa	Known RBP	4.96	□□□□□ -1.62
VPS71	YML041C	CAP1	P28495	268 aa	Known RBP	4.96	□□□□□ -1.62
VPS71	YML041C	HIS7	P33734	552 aa	Known RBP	4.96	□□□□□ -1.62
VPS71	YML041C	PPS1	P38148	807 aa		4.96	□□□□□ -1.62
VPS71	YML041C	RIC1	P40395	1056 aa		4.96	□□□□□ -1.62
VPS71	YML041C	ESL1	P40456	1118 aa		4.96	□□□□□ -1.62
VPS71	YML041C	TEL2	P53038	688 aa		4.96	□□□□□ -1.62
VPS71	YML041C	YAP1802	P53309	568 aa		4.96	□□□□□ -1.62
VPS71	YML041C	RNT1	Q02555	471 aa		4.96	□□□□□ -1.62
VPS71	YML041C	ATG21	Q02887	496 aa		4.96	□□□□□ -1.62
VPS71	YML041C	SDH5	Q08230	162 aa		4.96	□□□□□ -1.62
VPS71	YML041C	FUM1	P08417	488 aa	Known RBP	4.95	□□□□□ -1.62
VPS71	YML041C	SEC12	P11655	471 aa		4.95	□□□□□ -1.62
VPS71	YML041C	HCM1	P25364	564 aa		4.95	□□□□□ -1.62
VPS71	YML041C	NTH1	P32356	751 aa		4.95	□□□□□ -1.62
VPS71	YML041C	UME6	P39001	836 aa		4.95	□□□□□ -1.62
VPS71	YML041C	VPS8	P39702	1274 aa		4.95	□□□□□ -1.62
VPS71	YML041C	NDE1	P40215	560 aa		4.95	□□□□□ -1.62
VPS71	YML041C	SIP4	P46954	829 aa		4.95	□□□□□ -1.62
VPS71	YML041C	RPS15	Q01855	142 aa	Known RBP	4.95	□□□□□ -1.62
VPS71	YML041C	SNO4	Q04902	237 aa		4.95	□□□□□ -1.62
VPS71	YML041C	YDL086W	Q07505	273 aa		4.95	□□□□□ -1.62
VPS71	YML041C	HSP33	Q08914	237 aa	Known RBP	4.95	□□□□□ -1.62
VPS71	YML041C	HSP32	Q08992	237 aa		4.95	□□□□□ -1.62
VPS71	YML041C	FOB1	O13329	566 aa		4.94	□□□□□ -1.62
VPS71	YML041C	MRP7	P12687	371 aa		4.94	□□□□□ -1.62
VPS71	YML041C	DHR2	P36009	735 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS71	YML041C	YPT10	P38146	199 aa		4.94	□□□□□ -1.62
VPS71	YML041C	YGR151C	P53287	111 aa		4.94	□□□□□ -1.62
VPS71	YML041C	ATG4	P53867	494 aa		4.94	□□□□□ -1.62
VPS71	YML041C	YSH1	Q06224	779 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS71	YML041C	AIM39	Q08223	395 aa		4.94	□□□□□ -1.62
VPS71	YML041C	YOL073C	Q08232	322 aa		4.94	□□□□□ -1.62
VPS71	YML041C	ENT1	Q12518	454 aa		4.94	□□□□□ -1.62
VPS71	YML041C	SEM1	O94742	89 aa		4.93	□□□□□ -1.62
VPS71	YML041C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
VPS71	YML041C	SAN1	P22470	610 aa		4.93	□□□□□ -1.62
VPS71	YML041C	CNE1	P27825	502 aa		4.93	□□□□□ -1.62
VPS71	YML041C	PAH1	P32567	862 aa		4.93	□□□□□ -1.62
VPS71	YML041C	FMP10	P40098	244 aa		4.93	□□□□□ -1.62
VPS71	YML041C	TAM41	P53230	385 aa		4.93	□□□□□ -1.62
VPS71	YML041C	CBK1	P53894	756 aa		4.93	□□□□□ -1.62
VPS71	YML041C	GSF2	Q04697	403 aa	Known RBP	4.93	□□□□□ -1.62
VPS71	YML041C	HOF1	Q05080	669 aa		4.93	□□□□□ -1.62
VPS71	YML041C	RKI1	Q12189	258 aa		4.93	□□□□□ -1.62
VPS71	YML041C	COX17	Q12287	69 aa		4.93	□□□□□ -1.62
VPS71	YML041C	PET122	P10355	254 aa		4.92	□□□□□ -1.62
VPS71	YML041C	STE4	P18851	423 aa		4.92	□□□□□ -1.62
VPS71	YML041C	URK1	P27515	501 aa		4.92	□□□□□ -1.62
VPS71	YML041C	PMI40	P29952	429 aa	Known RBP	4.92	□□□□□ -1.62
VPS71	YML041C	RAD16	P31244	790 aa		4.92	□□□□□ -1.62
VPS71	YML041C	CDC5	P32562	705 aa		4.92	□□□□□ -1.62
VPS71	YML041C	ELF1	P36053	145 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms