RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C CIR1P42940 261 aa2.55□□□□□ -2
SIR3YLR442C YJR120WP47157 116 aa2.55□□□□□ -2
SIR3YLR442C AIM14P53109 570 aa2.55□□□□□ -2
SIR3YLR442C YBP2P53169 641 aa2.55□□□□□ -2
SIR3YLR442C TOF1P53840 1238 aa2.55□□□□□ -2
SIR3YLR442C KAP120Q02932 1032 aa2.55□□□□□ -2
SIR3YLR442C TRS120Q04183 1289 aa2.55□□□□□ -2
SIR3YLR442C ECM7Q06200 448 aa2.55□□□□□ -2
SIR3YLR442C BUD7Q08754 746 aa2.55□□□□□ -2
SIR3YLR442C ACF2Q12168 779 aa2.55□□□□□ -2
SIR3YLR442C HOS1Q12214 470 aa2.55□□□□□ -2
SIR3YLR442C GAL7P08431 366 aa2.55□□□□□ -2
SIR3YLR442C SPO16P17122 198 aa2.55□□□□□ -2
SIR3YLR442C HSP60P19882 572 aaKnown RBP2.55□□□□□ -2
SIR3YLR442C EFT1P32324 842 aaKnown RBP2.55□□□□□ -2
SIR3YLR442C SCT1P32784 759 aa2.55□□□□□ -2
SIR3YLR442C PRP40P33203 583 aaKnown RBP2.55□□□□□ -2
SIR3YLR442C VPS51P36116 164 aa2.55□□□□□ -2
SIR3YLR442C APD1P38281 316 aa2.55□□□□□ -2
SIR3YLR442C BUD16P39988 312 aa2.55□□□□□ -2
SIR3YLR442C YTA12P40341 825 aa2.55□□□□□ -2
SIR3YLR442C APS3P47064 194 aa2.55□□□□□ -2
SIR3YLR442C MSE1P48525 536 aa2.55□□□□□ -2
SIR3YLR442C SPT20P50875 604 aa2.55□□□□□ -2
SIR3YLR442C ZIP2P53061 704 aa2.55□□□□□ -2
SIR3YLR442C YGR122WP53272 402 aa2.55□□□□□ -2
SIR3YLR442C YGR266WP53326 701 aa2.55□□□□□ -2
SIR3YLR442C VAC7P53950 1165 aa2.55□□□□□ -2
SIR3YLR442C TFB2Q02939 513 aa2.55□□□□□ -2
SIR3YLR442C UME1Q03010 460 aa2.55□□□□□ -2
SIR3YLR442C HFD1Q04458 532 aa2.55□□□□□ -2
SIR3YLR442C PDR8Q06149 701 aa2.55□□□□□ -2
SIR3YLR442C CUE5Q08412 411 aaKnown RBP2.55□□□□□ -2
SIR3YLR442C VPS54Q12071 889 aa2.55□□□□□ -2
SIR3YLR442C RAV1P47104 1357 aa2.54□□□□□ -2
SIR3YLR442C PDX1P16451 410 aa2.54□□□□□ -2
SIR3YLR442C PFK2P16862 959 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SIR3YLR442C CDC42P19073 191 aa2.54□□□□□ -2
SIR3YLR442C DBP2P24783 546 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C MET4P32389 672 aa2.54□□□□□ -2
SIR3YLR442C UBC6P33296 250 aaPredicted RBP2.54□□□□□ -2
SIR3YLR442C GDH2P33327 1092 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C PHO11P35842 467 aa2.54□□□□□ -2
SIR3YLR442C YKL023WP36103 277 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C TYS1P36421 394 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C ALG3P38179 458 aa2.54□□□□□ -2
SIR3YLR442C YBR242WP38331 238 aa2.54□□□□□ -2
SIR3YLR442C YMR262WP38430 313 aa2.54□□□□□ -2
SIR3YLR442C PHO12P38693 467 aa2.54□□□□□ -2
SIR3YLR442C SIP3P38717 1229 aa2.54□□□□□ -2
SIR3YLR442C PPE1P38796 400 aa2.54□□□□□ -2
SIR3YLR442C THO1P40040 218 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C ATF1P40353 525 aa2.54□□□□□ -2
SIR3YLR442C YIL161WP40449 235 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C MDJ2P42834 146 aa2.54□□□□□ -2
SIR3YLR442C GYP8P43570 497 aa2.54□□□□□ -2
SIR3YLR442C TEL2P53038 688 aa2.54□□□□□ -2
SIR3YLR442C MPS2P53159 387 aa2.54□□□□□ -2
SIR3YLR442C ASI1P54074 624 aa2.54□□□□□ -2
SIR3YLR442C ERV25P54837 211 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C VHS3Q08438 674 aa2.54□□□□□ -2
SIR3YLR442C BUG1Q12191 341 aa2.54□□□□□ -2
SIR3YLR442C TIP41Q12199 356 aa2.54□□□□□ -2
SIR3YLR442C YOR019WQ99248 730 aa2.54□□□□□ -2
SIR3YLR442C TRM3Q07527 1436 aa2.54□□□□□ -2
SIR3YLR442C DRS2P39524 1355 aa2.54□□□□□ -2
SIR3YLR442C NUP157P40064 1391 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C GPA1P08539 472 aa2.54□□□□□ -2
SIR3YLR442C YAK1P14680 807 aa2.54□□□□□ -2
SIR3YLR442C CMK2P22517 447 aa2.54□□□□□ -2
SIR3YLR442C KCC4P25389 1037 aa2.54□□□□□ -2
SIR3YLR442C MSH1P25846 959 aa2.54□□□□□ -2
SIR3YLR442C YJU2P28320 278 aaPredicted RBP2.54□□□□□ -2
SIR3YLR442C TPS2P31688 896 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C DBF20P32328 564 aa2.54□□□□□ -2
SIR3YLR442C RPT3P33298 428 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C TFC4P33339 1025 aa2.54□□□□□ -2
SIR3YLR442C HCS1P34243 683 aa2.54□□□□□ -2
SIR3YLR442C NUP133P36161 1157 aa2.54□□□□□ -2
SIR3YLR442C OLA1P38219 394 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C OSH3P38713 996 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C PEX28P38848 579 aa2.54□□□□□ -2
SIR3YLR442C UTP25P40498 721 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C YIL089WP40500 205 aa2.54□□□□□ -2
SIR3YLR442C YJL045WP47052 634 aa2.54□□□□□ -2
SIR3YLR442C VPS53P47061 822 aa2.54□□□□□ -2
SIR3YLR442C COX16P47081 118 aa2.54□□□□□ -2
SIR3YLR442C GCV2P49095 1034 aa2.54□□□□□ -2
SIR3YLR442C HNT2P49775 206 aa2.54□□□□□ -2
SIR3YLR442C YGR125WP53273 1036 aa2.54□□□□□ -2
SIR3YLR442C FDC1Q03034 503 aa2.54□□□□□ -2
SIR3YLR442C RMT2Q03305 412 aa2.54□□□□□ -2
SIR3YLR442C GFD1Q04839 188 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C DON1Q05610 365 aa2.54□□□□□ -2
SIR3YLR442C DUS4Q06063 367 aa2.54□□□□□ -2
SIR3YLR442C SPH1Q06160 661 aa2.54□□□□□ -2
SIR3YLR442C BCP1Q06338 283 aa2.54□□□□□ -2
SIR3YLR442C ESC2Q06340 456 aa2.54□□□□□ -2
SIR3YLR442C NTG2Q08214 380 aa2.54□□□□□ -2
SIR3YLR442C INP54Q08227 384 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms