RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	YFL054C	P43549	646 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	FYV8	P46949	817 aa	Known RBP	5.93	□□□□□ -1.46
DBP9	YLR276C	BNA1	P47096	177 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	NIT3	P49954	291 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	CAF120	P53836	1060 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	CIK1	Q01649	594 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	DCS1	Q06151	350 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	GPN2	Q08726	347 aa	Predicted RBP	5.93	□□□□□ -1.46
DBP9	YLR276C	YPR027C	Q12079	277 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	YOL114C	Q12322	202 aa		5.93	□□□□□ -1.46
DBP9	YLR276C	REP1	P03871	373 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	DIT1	P21623	536 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	MSM1	P22438	575 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	SEC21	P32074	935 aa	Known RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	BEM3	P32873	1128 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	AAP1	P37898	856 aa	Known RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	YBR062C	P38239	180 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	VMA22	P38784	181 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	RPN3	P40016	523 aa	Known RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	EFM4	P40516	257 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	RLP7	P40693	322 aa	Known RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	UBC9	P50623	157 aa	Predicted RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	MTC3	P53077	123 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	NCE103	P53615	221 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	UBP2	Q01476	1272 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.92	□□□□□ -1.46	not detected
DBP9	YLR276C	AVO1	Q08236	1176 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	ELG1	Q12050	791 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	YLL058W	Q12198	575 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	BBP1	Q12365	385 aa		5.92	□□□□□ -1.46
DBP9	YLR276C	SNU66	Q12420	587 aa	Predicted RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	RPS21B	Q3E754	87 aa	Known RBP	5.92	□□□□□ -1.46
DBP9	YLR276C	RPS19A	P07280	144 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	RPS19B	P07281	144 aa	Predicted RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	PYC1	P11154	1178 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	SEN2	P16658	377 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	KGD2	P19262	463 aa	Predicted RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	MRPL25	P23369	157 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	CHS3	P29465	1165 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	MVD1	P32377	396 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	OAF3	P36023	863 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	UGA2	P38067	497 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	MAL31	P38156	614 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	MCX1	P38323	520 aa	Predicted RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	RTS1	P38903	757 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	GPD2	P41911	440 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	SRB7	P47822	140 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	ENP2	P48234	707 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	MEH1	Q02205	184 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	OPY2	Q06810	360 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	MED1	Q12321	566 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	SCM3	Q12334	223 aa		5.91	□□□□□ -1.46
DBP9	YLR276C	NUP188	P52593	1655 aa	Known RBP	5.91	□□□□□ -1.46
DBP9	YLR276C	SNA3	P14359	133 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	ERS1	P17261	260 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	PHO81	P17442	1178 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	REC107	P21651	314 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	UBA1	P22515	1024 aa	Known RBP	5.9	□□□□□ -1.46
DBP9	YLR276C	VPH2	P32341	215 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	FES1	P38260	290 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	HSL7	P38274	827 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	RPN10	P38886	268 aa	Known RBP	5.9	□□□□□ -1.46
DBP9	YLR276C	GIP2	P40036	548 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	ESL1	P40456	1118 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	GCD10	P41814	478 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	HAM1	P47119	197 aa	Known RBP	5.9	□□□□□ -1.46
DBP9	YLR276C	MCM6	P53091	1017 aa	Known RBP	5.9	□□□□□ -1.46
DBP9	YLR276C	MEP3	P53390	489 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	ELA1	P53861	379 aa	Predicted RBP	5.9	□□□□□ -1.46
DBP9	YLR276C	USA1	Q03714	838 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	COA4	Q05809	96 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	HIM1	Q06674	414 aa		5.9	□□□□□ -1.46
DBP9	YLR276C	CDC8	P00572	216 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	PDE2	P06776	526 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	HEM1	P09950	548 aa	Predicted RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	CMP2	P14747	604 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	FPS1	P23900	669 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	DPB2	P24482	689 aa	Predicted RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	NIP1	P32497	812 aa	Known RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	PET309	P32522	965 aa	Predicted RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	APL2	P36000	726 aa	Predicted RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	JNM1	P36224	373 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	FAT1	P38225	669 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	FCY21	P40039	528 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	DOT6	P40059	670 aa	Known RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	LAM5	P43560	674 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	IML2	P47031	731 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	RNR4	P49723	345 aa	Known RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	MOT3	P54785	490 aa	Known RBP	5.9	□□□□□ -1.47
DBP9	YLR276C	SRT1	Q03175	343 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	YDR179W-A	Q03983	463 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	RIM20	Q12033	661 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	DCS2	Q12123	353 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	YBR182C-A	Q8TGU6	64 aa		5.9	□□□□□ -1.47
DBP9	YLR276C	PGK1	P00560	416 aa	Known RBP	5.89	□□□□□ -1.47
DBP9	YLR276C	SEC18	P18759	758 aa	Known RBP	5.89	□□□□□ -1.47
DBP9	YLR276C	HOP1	P20050	605 aa		5.89	□□□□□ -1.47
DBP9	YLR276C	ATP12	P22135	325 aa		5.89	□□□□□ -1.47
DBP9	YLR276C	CNA1	P23287	553 aa		5.89	□□□□□ -1.47
DBP9	YLR276C	MCM4	P30665	933 aa	Known RBP	5.89	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms