RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	RPS7A	P26786	190 aa	Known RBP	5.81	□□□□□ -1.48
VTA1	YLR181C	PTH2	P34222	208 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	CCL1	P37366	393 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	YMC2	P38087	329 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	FUI1	P38196	639 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	PIH1	P38768	344 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	SPC72	P39723	622 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	POL31	P46957	487 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	COS12	P53053	380 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	RPS15	Q01855	142 aa	Known RBP	5.81	□□□□□ -1.48
VTA1	YLR181C	USA1	Q03714	838 aa		5.81	□□□□□ -1.48
VTA1	YLR181C	DNA2	P38859	1522 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	CTT1	P06115	562 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	SIR1	P21691	654 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	VPS34	P22543	875 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	PRP45	P28004	379 aa	Predicted RBP	5.8	□□□□□ -1.48
VTA1	YLR181C	LOT5	P34234	306 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	TDP1	P38319	544 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	MUP3	P38734	546 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	IES5	P40060	125 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	IDS2	P46958	469 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	EIS1	Q05050	843 aa	Known RBP	5.8	□□□□□ -1.48
VTA1	YLR181C	TGS1	Q12052	315 aa		5.8	□□□□□ -1.48
VTA1	YLR181C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
VTA1	YLR181C	POL3	P15436	1097 aa		5.79	□□□□□ -1.48
VTA1	YLR181C	MCM3	P24279	971 aa	Known RBP	5.79	□□□□□ -1.48
VTA1	YLR181C	CPR6	P53691	371 aa	Known RBP	5.79	□□□□□ -1.48
VTA1	YLR181C	VPS64	Q03944	604 aa		5.79	□□□□□ -1.48
VTA1	YLR181C	YDL073W	Q07454	984 aa		5.79	□□□□□ -1.48
VTA1	YLR181C	TPK2	P06245	380 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	STE12	P13574	688 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	MSM1	P22438	575 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	PRE2	P30656	287 aa	Known RBP	5.78	□□□□□ -1.48
VTA1	YLR181C	DBF20	P32328	564 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	FRD1	P32614	470 aa	Known RBP	5.78	□□□□□ -1.48
VTA1	YLR181C	EMP70	P32802	667 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	MRS6	P32864	603 aa	Known RBP	5.78	□□□□□ -1.48
VTA1	YLR181C	RPT2	P40327	437 aa	Known RBP	5.78	□□□□□ -1.48
VTA1	YLR181C	IWR1	Q07532	353 aa	Predicted RBP	5.78	□□□□□ -1.48
VTA1	YLR181C	REV3	P14284	1504 aa		5.78	□□□□□ -1.48
VTA1	YLR181C	MIS1	P09440	975 aa	Known RBP	5.77	□□□□□ -1.49
VTA1	YLR181C	SDH8	P38345	138 aa		5.77	□□□□□ -1.49
VTA1	YLR181C	CAB2	P40506	365 aa		5.77	□□□□□ -1.49
VTA1	YLR181C	QRI1	P43123	477 aa	Known RBP	5.77	□□□□□ -1.49
VTA1	YLR181C	ASN1	P49089	572 aa	Known RBP	5.77	□□□□□ -1.49
VTA1	YLR181C	YGR021W	P53212	290 aa		5.77	□□□□□ -1.49
VTA1	YLR181C	ZPS1	Q12512	249 aa		5.77	□□□□□ -1.49
VTA1	YLR181C	RIT1	P23796	513 aa		5.76	□□□□□ -1.49
VTA1	YLR181C	SWI4	P25302	1093 aa	Known RBP	5.76	□□□□□ -1.49
VTA1	YLR181C	ARA2	Q04212	335 aa		5.76	□□□□□ -1.49
VTA1	YLR181C	RPN13	O13563	156 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	ADE3	P07245	946 aa	Known RBP	5.75	□□□□□ -1.49
VTA1	YLR181C	YPK1	P12688	680 aa	Known RBP	5.75	□□□□□ -1.49
VTA1	YLR181C	YEL020C	P39994	560 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	PUG1	P40100	303 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	YIL166C	P40445	542 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	SAP185	P40856	1058 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	ERR3	P42222	437 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	SAP4	P53036	818 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	COQ6	P53318	479 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	CPR8	P53728	308 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	CIA1	Q05583	330 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	BLS1	Q06071	122 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	AIM6	Q07716	390 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	ICL2	Q12031	575 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	SUT2	Q12286	268 aa		5.75	□□□□□ -1.49
VTA1	YLR181C	SIN3	P22579	1536 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	CPA2	P03965	1118 aa	Known RBP	5.74	□□□□□ -1.49
VTA1	YLR181C	WHI2	P12611	486 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	TRX2	P22803	104 aa	Known RBP	5.74	□□□□□ -1.49
VTA1	YLR181C	YCR061W	P25639	631 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	CDC5	P32562	705 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	YPT10	P38146	199 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	ARB1	P40024	610 aa	Known RBP	5.74	□□□□□ -1.49
VTA1	YLR181C	YGL117W	P53133	265 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	ESF2	P53743	316 aa	Known RBP	5.74	□□□□□ -1.49
VTA1	YLR181C	CRF1	Q04930	467 aa		5.74	□□□□□ -1.49
VTA1	YLR181C	THO2	P53552	1597 aa	Known RBP	5.74	□□□□□ -1.49
VTA1	YLR181C	RNR3	P21672	869 aa	Known RBP	5.73	□□□□□ -1.49
VTA1	YLR181C	RPA135	P22138	1203 aa	Known RBP	5.73	□□□□□ -1.49
VTA1	YLR181C	SPO11	P23179	398 aa		5.73	□□□□□ -1.49
VTA1	YLR181C	CLB4	P24871	460 aa		5.73	□□□□□ -1.49
VTA1	YLR181C	FAF1	P40546	346 aa	Predicted RBP	5.73	□□□□□ -1.49
VTA1	YLR181C	APM1	Q00776	475 aa	Predicted RBP	5.73	□□□□□ -1.49
VTA1	YLR181C	PSR2	Q07949	397 aa		5.73	□□□□□ -1.49
VTA1	YLR181C	SAT4	P25333	603 aa	Known RBP	5.72	□□□□□ -1.49
VTA1	YLR181C	YBR138C	P38277	524 aa		5.72	□□□□□ -1.49
VTA1	YLR181C	LNP1	P38878	278 aa		5.72	□□□□□ -1.49
VTA1	YLR181C	ARC35	P53731	342 aa	Known RBP	5.72	□□□□□ -1.49
VTA1	YLR181C	ATG21	Q02887	496 aa		5.72	□□□□□ -1.49
VTA1	YLR181C	GFD1	Q04839	188 aa	Known RBP	5.72	□□□□□ -1.49
VTA1	YLR181C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
VTA1	YLR181C	AAC1	P04710	309 aa		5.71	□□□□□ -1.5
VTA1	YLR181C	NCP1	P16603	691 aa	Known RBP	5.71	□□□□□ -1.5
VTA1	YLR181C	DPB3	P27344	201 aa		5.71	□□□□□ -1.5
VTA1	YLR181C	ARP2	P32381	391 aa	Known RBP	5.71	□□□□□ -1.5
VTA1	YLR181C	UGP1	P32861	499 aa	Known RBP	5.71	□□□□□ -1.5
VTA1	YLR181C	IMA1	P53051	589 aa		5.71	□□□□□ -1.5
VTA1	YLR181C	YPL108W	Q02872	168 aa	Predicted RBP	5.71	□□□□□ -1.5
VTA1	YLR181C	GIS1	Q03833	894 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms