RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YJL055WP47044 245 aa2.69□□□□□ -1.98
SDC25YLL016W MTR3P48240 250 aaPredicted RBP2.69□□□□□ -1.98
SDC25YLL016W EXG2P52911 562 aa2.69□□□□□ -1.98
SDC25YLL016W ADY3Q07732 790 aa2.69□□□□□ -1.98
SDC25YLL016W RTK1Q12100 620 aaPredicted RBP2.69□□□□□ -1.98
SDC25YLL016W SVS1Q12254 260 aa2.69□□□□□ -1.98
SDC25YLL016W RTN2Q12443 393 aa2.69□□□□□ -1.98
SDC25YLL016W SIR1P21691 654 aa2.69□□□□□ -1.98
SDC25YLL016W GPT2P36148 743 aa2.69□□□□□ -1.98
SDC25YLL016W APN2P38207 520 aa2.69□□□□□ -1.98
SDC25YLL016W NPR3P38742 1146 aa2.69□□□□□ -1.98
SDC25YLL016W GDI1P39958 451 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W YIL089WP40500 205 aa2.69□□□□□ -1.98
SDC25YLL016W LCB2P40970 561 aa2.69□□□□□ -1.98
SDC25YLL016W SAE2P46946 345 aa2.69□□□□□ -1.98
SDC25YLL016W MTC3P53077 123 aa2.69□□□□□ -1.98
SDC25YLL016W DUO1P53168 247 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W ART5P53244 586 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W ARE2P53629 642 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W SEC5P89102 971 aa2.69□□□□□ -1.98
SDC25YLL016W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SDC25YLL016W VHS3Q08438 674 aa2.69□□□□□ -1.98
SDC25YLL016W PUS7Q08647 676 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W RVB2Q12464 471 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W PAR32Q12515 295 aaKnown RBP2.69□□□□□ -1.98
SDC25YLL016W ATG11Q12527 1178 aa2.69□□□□□ -1.98
SDC25YLL016W YBR126W-AQ8TGU7 68 aa2.69□□□□□ -1.98
SDC25YLL016W GLK1P17709 500 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W SNF5P18480 905 aa2.68□□□□□ -1.98
SDC25YLL016W APE3P37302 537 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W YBL029WP38201 376 aa2.68□□□□□ -1.98
SDC25YLL016W ALG14P38242 237 aa2.68□□□□□ -1.98
SDC25YLL016W BEM4P39011 633 aa2.68□□□□□ -1.98
SDC25YLL016W SSP120P39931 234 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W CAB2P40506 365 aa2.68□□□□□ -1.98
SDC25YLL016W MNT2P53059 558 aa2.68□□□□□ -1.98
SDC25YLL016W NAM8Q00539 523 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W RLP24Q07915 199 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W ESC8Q08119 714 aa2.68□□□□□ -1.98
SDC25YLL016W SGO1Q08490 590 aa2.68□□□□□ -1.98
SDC25YLL016W THI21Q08975 551 aa2.68□□□□□ -1.98
SDC25YLL016W LYS21Q12122 440 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W FAS2P19097 1887 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W UTP10P42945 1769 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W SAC6P32599 642 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W NPL6P32832 435 aa2.68□□□□□ -1.98
SDC25YLL016W SRP101P32916 621 aa2.68□□□□□ -1.98
SDC25YLL016W SSY5P47002 699 aa2.68□□□□□ -1.98
SDC25YLL016W PUS4P48567 403 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W HFM1P51979 1187 aa2.68□□□□□ -1.98
SDC25YLL016W CUZ1P53899 274 aa2.68□□□□□ -1.98
SDC25YLL016W CIK1Q01649 594 aa2.68□□□□□ -1.98
SDC25YLL016W ATG21Q02887 496 aa2.68□□□□□ -1.98
SDC25YLL016W OPT2Q06593 877 aa2.68□□□□□ -1.98
SDC25YLL016W XYL2Q07993 356 aa2.68□□□□□ -1.98
SDC25YLL016W SLP1Q12232 587 aa2.68□□□□□ -1.98
SDC25YLL016W SUI3P09064 285 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W CDC24P11433 854 aaPredicted RBP2.68□□□□□ -1.98
SDC25YLL016W CBF2P32504 956 aa2.68□□□□□ -1.98
SDC25YLL016W RPN2P32565 945 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W KTR3P38130 404 aaPredicted RBP2.68□□□□□ -1.98
SDC25YLL016W ECM21P38167 1117 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W YLF2P38746 405 aa2.68□□□□□ -1.98
SDC25YLL016W UTP9P38882 575 aaKnown RBP2.68□□□□□ -1.98
SDC25YLL016W SSU1P41930 458 aa2.68□□□□□ -1.98
SDC25YLL016W YBP2P53169 641 aa2.68□□□□□ -1.98
SDC25YLL016W COX18P53239 316 aa2.68□□□□□ -1.98
SDC25YLL016W YNR071CP53757 342 aa2.68□□□□□ -1.98
SDC25YLL016W AIM32Q04689 311 aa2.68□□□□□ -1.98
SDC25YLL016W YPS7Q06325 596 aa2.68□□□□□ -1.98
SDC25YLL016W RPO41P13433 1351 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W OLE1P21147 510 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W NAR1P23503 491 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W PRP22P24384 1145 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W ERG3P32353 365 aa2.67□□□□□ -1.98
SDC25YLL016W MF(ALPHA)2P32435 120 aa2.67□□□□□ -1.98
SDC25YLL016W AKL1P38080 1108 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W YHL012WP38709 493 aa2.67□□□□□ -1.98
SDC25YLL016W CEM1P39525 442 aa2.67□□□□□ -1.98
SDC25YLL016W LSM5P40089 93 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W SEC28P40509 296 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W MAD2P40958 196 aa2.67□□□□□ -1.98
SDC25YLL016W FYV8P46949 817 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W PSP1P50896 841 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W SCW11P53189 542 aa2.67□□□□□ -1.98
SDC25YLL016W YMR111CQ04461 462 aaPredicted RBP2.67□□□□□ -1.98
SDC25YLL016W SSL1Q04673 461 aaPredicted RBP2.67□□□□□ -1.98
SDC25YLL016W PCD1Q12524 340 aa2.67□□□□□ -1.98
SDC25YLL016W ROX1P25042 368 aa2.67□□□□□ -1.98
SDC25YLL016W SPO22P40511 975 aa2.67□□□□□ -1.98
SDC25YLL016W POL31P46957 487 aa2.67□□□□□ -1.98
SDC25YLL016W ZAP1P47043 880 aa2.67□□□□□ -1.98
SDC25YLL016W COG1P53079 417 aa2.67□□□□□ -1.98
SDC25YLL016W DSD1P53095 428 aa2.67□□□□□ -1.98
SDC25YLL016W DSE4P53753 1117 aa2.67□□□□□ -1.98
SDC25YLL016W ZDS2P54786 942 aa2.67□□□□□ -1.98
SDC25YLL016W LEE1Q02799 301 aaKnown RBP2.67□□□□□ -1.98
SDC25YLL016W PEX25Q02969 394 aa2.67□□□□□ -1.98
SDC25YLL016W GIS4Q04233 774 aa2.67□□□□□ -1.98
SDC25YLL016W RIX7Q07844 837 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms