RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W SDH5Q08230 162 aa4.51□□□□□ -1.69
CTK1YKL139W IRC13Q08630 104 aa4.51□□□□□ -1.69
CTK1YKL139W TRM13Q12383 476 aa4.51□□□□□ -1.69
CTK1YKL139W FUM1P08417 488 aaKnown RBP4.5□□□□□ -1.69
CTK1YKL139W PRE10P21242 288 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
CTK1YKL139W PRP45P28004 379 aaPredicted RBP4.5□□□□□ -1.69
CTK1YKL139W CBF2P32504 956 aa4.5□□□□□ -1.69
CTK1YKL139W HIS7P33734 552 aaKnown RBP4.5□□□□□ -1.69
CTK1YKL139W SRB7P47822 140 aa4.5□□□□□ -1.69
CTK1YKL139W COS12P53053 380 aa4.5□□□□□ -1.69
CTK1YKL139W HOF1Q05080 669 aa4.5□□□□□ -1.69
CTK1YKL139W AIM6Q07716 390 aa4.5□□□□□ -1.69
CTK1YKL139W SUL2Q12325 893 aa4.5□□□□□ -1.69
CTK1YKL139W CDC16P09798 840 aa4.49□□□□□ -1.69
CTK1YKL139W STE11P23561 717 aa4.49□□□□□ -1.69
CTK1YKL139W DSS4P32601 143 aa4.49□□□□□ -1.69
CTK1YKL139W REV7P38927 245 aa4.49□□□□□ -1.69
CTK1YKL139W RIC1P40395 1056 aa4.49□□□□□ -1.69
CTK1YKL139W MNN10P50108 393 aaKnown RBP4.49□□□□□ -1.69
CTK1YKL139W TEL2P53038 688 aa4.49□□□□□ -1.69
CTK1YKL139W IMH1Q06704 911 aaKnown RBP4.49□□□□□ -1.69
CTK1YKL139W YKL033W-AQ86ZR7 236 aa4.49□□□□□ -1.69
CTK1YKL139W FOB1O13329 566 aa4.48□□□□□ -1.69
CTK1YKL139W PET122P10355 254 aa4.48□□□□□ -1.69
CTK1YKL139W PRP6P19735 899 aaPredicted RBP4.48□□□□□ -1.69
CTK1YKL139W NTH1P32356 751 aa4.48□□□□□ -1.69
CTK1YKL139W PHO11P35842 467 aa4.48□□□□□ -1.69
CTK1YKL139W PHO12P38693 467 aa4.48□□□□□ -1.69
CTK1YKL139W KHA1P40309 873 aa4.48□□□□□ -1.69
CTK1YKL139W LYS14P40971 790 aa4.48□□□□□ -1.69
CTK1YKL139W IDS2P46958 469 aa4.48□□□□□ -1.69
CTK1YKL139W YJL163CP46996 555 aa4.48□□□□□ -1.69
CTK1YKL139W COG1P53079 417 aa4.48□□□□□ -1.69
CTK1YKL139W MAC1P35192 417 aa4.48□□□□□ -1.69
CTK1YKL139W ARB1P40024 610 aaKnown RBP4.48□□□□□ -1.69
CTK1YKL139W ZAP1P47043 880 aa4.48□□□□□ -1.69
CTK1YKL139W PRP43P53131 767 aaKnown RBP4.48□□□□□ -1.69
CTK1YKL139W GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
CTK1YKL139W IZH3Q07959 543 aa4.48□□□□□ -1.69
CTK1YKL139W FRE5Q08908 694 aa4.48□□□□□ -1.69
CTK1YKL139W ERP4Q12450 207 aa4.48□□□□□ -1.69
CTK1YKL139W YLR358CO13565 187 aa4.47□□□□□ -1.69
CTK1YKL139W SEM1O94742 89 aa4.47□□□□□ -1.69
CTK1YKL139W SIR3P06701 978 aa4.47□□□□□ -1.69
CTK1YKL139W MRP7P12687 371 aa4.47□□□□□ -1.69
CTK1YKL139W MET8P15807 274 aa4.47□□□□□ -1.69
CTK1YKL139W NFU1P32860 256 aa4.47□□□□□ -1.69
CTK1YKL139W MRPL7P36519 292 aa4.47□□□□□ -1.69
CTK1YKL139W CTP1P38152 299 aa4.47□□□□□ -1.69
CTK1YKL139W TAM41P53230 385 aa4.47□□□□□ -1.69
CTK1YKL139W FHN1P53279 174 aa4.47□□□□□ -1.69
CTK1YKL139W YPL108WQ02872 168 aaPredicted RBP4.47□□□□□ -1.69
CTK1YKL139W MLH3Q12083 715 aa4.47□□□□□ -1.69
CTK1YKL139W YLR302CO13544 120 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-LR1P0C2J4 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-FP0CX61 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-GR2P0CX62 438 aa4.46□□□□□ -1.7
CTK1YKL139W ERG4P25340 473 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-CP25383 438 aa4.46□□□□□ -1.7
CTK1YKL139W FUB1P25659 250 aa4.46□□□□□ -1.7
CTK1YKL139W DHR2P36009 735 aaPredicted RBP4.46□□□□□ -1.7
CTK1YKL139W ELF1P36053 145 aa4.46□□□□□ -1.7
CTK1YKL139W UBS1P38290 277 aa4.46□□□□□ -1.7
CTK1YKL139W FMP52P40008 231 aa4.46□□□□□ -1.7
CTK1YKL139W RBG2P53295 368 aaKnown RBP4.46□□□□□ -1.7
CTK1YKL139W YAP1802P53309 568 aa4.46□□□□□ -1.7
CTK1YKL139W BSC5P53755 489 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-DR2Q03483 438 aa4.46□□□□□ -1.7
CTK1YKL139W EFR3Q03653 782 aaKnown RBP4.46□□□□□ -1.7
CTK1YKL139W VAM6Q07468 1049 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-BQ12260 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-OR2Q12293 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-DR1Q12392 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-OR1Q12439 438 aa4.46□□□□□ -1.7
CTK1YKL139W TY2A-DR3Q99303 438 aa4.46□□□□□ -1.7
CTK1YKL139W ATP2P00830 511 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W THR1P17423 357 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W VPS34P22543 875 aa4.45□□□□□ -1.7
CTK1YKL139W CMK1P27466 446 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W EFT1P32324 842 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W GCD7P32502 381 aaPredicted RBP4.45□□□□□ -1.7
CTK1YKL139W YHR097CP38809 366 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W IST3P40565 148 aaPredicted RBP4.45□□□□□ -1.7
CTK1YKL139W CSL4P53859 292 aaPredicted RBP4.45□□□□□ -1.7
CTK1YKL139W CRF1Q04930 467 aa4.45□□□□□ -1.7
CTK1YKL139W STP3Q05937 343 aa4.45□□□□□ -1.7
CTK1YKL139W YDL086WQ07505 273 aa4.45□□□□□ -1.7
CTK1YKL139W USV1Q12132 391 aa4.45□□□□□ -1.7
CTK1YKL139W SKM1Q12469 655 aa4.45□□□□□ -1.7
CTK1YKL139W GLT1Q12680 2145 aaKnown RBP4.45□□□□□ -1.7
CTK1YKL139W PMA1P05030 918 aaKnown RBP4.44□□□□□ -1.7
CTK1YKL139W YCR061WP25639 631 aa4.44□□□□□ -1.7
CTK1YKL139W SWC3P31376 625 aa4.44□□□□□ -1.7
CTK1YKL139W NUP120P35729 1037 aa4.44□□□□□ -1.7
CTK1YKL139W ESL2P36168 1195 aa4.44□□□□□ -1.7
CTK1YKL139W YJR061WP40355 935 aa4.44□□□□□ -1.7
CTK1YKL139W PHO23P50947 330 aa4.44□□□□□ -1.7
CTK1YKL139W MDG1P53885 366 aa4.44□□□□□ -1.7
CTK1YKL139W TIM10P87108 93 aa4.44□□□□□ -1.7
CTK1YKL139W REG1Q00816 1014 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms