RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C RPS21AP0C0V8 87 aaKnown RBP2.69□□□□□ -1.98
SHE2YKL130C WHI2P12611 486 aa2.69□□□□□ -1.98
SHE2YKL130C CNE1P27825 502 aa2.69□□□□□ -1.98
SHE2YKL130C SEC65P29478 273 aa2.69□□□□□ -1.98
SHE2YKL130C MRPL7P36519 292 aa2.69□□□□□ -1.98
SHE2YKL130C RRP8P38961 392 aaKnown RBP2.69□□□□□ -1.98
SHE2YKL130C HIS6P40545 261 aa2.69□□□□□ -1.98
SHE2YKL130C BUD8P41698 603 aa2.69□□□□□ -1.98
SHE2YKL130C HOL1P53389 586 aa2.69□□□□□ -1.98
SHE2YKL130C LSC1P53598 329 aaKnown RBP2.69□□□□□ -1.98
SHE2YKL130C BUD17P53727 317 aa2.69□□□□□ -1.98
SHE2YKL130C TIM50Q02776 476 aa2.69□□□□□ -1.98
SHE2YKL130C PPN1Q04119 674 aa2.69□□□□□ -1.98
SHE2YKL130C ENT2Q05785 613 aa2.69□□□□□ -1.98
SHE2YKL130C YPS7Q06325 596 aa2.69□□□□□ -1.98
SHE2YKL130C YAP1P19880 650 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C IME1P21190 360 aa2.68□□□□□ -1.98
SHE2YKL130C YHL041WP38730 149 aa2.68□□□□□ -1.98
SHE2YKL130C EXO1P39875 702 aa2.68□□□□□ -1.98
SHE2YKL130C YGR054WP53235 642 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C CNM67P53865 581 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C IDP3P53982 420 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C FDC1Q03034 503 aa2.68□□□□□ -1.98
SHE2YKL130C GFD1Q04839 188 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C CRC1Q12289 327 aa2.68□□□□□ -1.98
SHE2YKL130C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
SHE2YKL130C RPS21BQ3E754 87 aaKnown RBP2.68□□□□□ -1.98
SHE2YKL130C SWI6P09959 803 aa2.67□□□□□ -1.98
SHE2YKL130C PHO81P17442 1178 aa2.67□□□□□ -1.98
SHE2YKL130C BST1P43571 1029 aa2.67□□□□□ -1.98
SHE2YKL130C YFL015CP43578 164 aa2.67□□□□□ -1.98
SHE2YKL130C ENP2P48234 707 aaKnown RBP2.67□□□□□ -1.98
SHE2YKL130C BSP1Q06604 576 aa2.67□□□□□ -1.98
SHE2YKL130C YPR089WO13585 888 aa2.66□□□□□ -1.98
SHE2YKL130C HOP1P20050 605 aa2.66□□□□□ -1.98
SHE2YKL130C RNR3P21672 869 aaKnown RBP2.66□□□□□ -1.98
SHE2YKL130C PRE4P30657 266 aa2.66□□□□□ -1.98
SHE2YKL130C SSH4P32343 579 aa2.66□□□□□ -1.98
SHE2YKL130C SER1P33330 395 aaKnown RBP2.66□□□□□ -1.98
SHE2YKL130C LOT5P34234 306 aa2.66□□□□□ -1.98
SHE2YKL130C GCS1P35197 352 aa2.66□□□□□ -1.98
SHE2YKL130C DHR2P36009 735 aaPredicted RBP2.66□□□□□ -1.98
SHE2YKL130C SDS22P36047 338 aa2.66□□□□□ -1.98
SHE2YKL130C FAT1P38225 669 aa2.66□□□□□ -1.98
SHE2YKL130C SRP68P38687 599 aaKnown RBP2.66□□□□□ -1.98
SHE2YKL130C CRG1P38892 291 aaRIP-Chip data2.66□□□□□ -1.98not detected
SHE2YKL130C DUN1P39009 513 aa2.66□□□□□ -1.98
SHE2YKL130C SAW1P39735 261 aa2.66□□□□□ -1.98
SHE2YKL130C ACA1P39970 489 aa2.66□□□□□ -1.98
SHE2YKL130C FTR1P40088 404 aa2.66□□□□□ -1.98
SHE2YKL130C VPS27P40343 622 aaKnown RBP2.66□□□□□ -1.98
SHE2YKL130C SAP185P40856 1058 aa2.66□□□□□ -1.98
SHE2YKL130C OPT1P40897 799 aa2.66□□□□□ -1.98
SHE2YKL130C QRI7P43122 407 aa2.66□□□□□ -1.98
SHE2YKL130C GIS2P53849 153 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SHE2YKL130C ECM38Q05902 660 aaPredicted RBP2.66□□□□□ -1.98
SHE2YKL130C TGS1Q12052 315 aa2.66□□□□□ -1.98
SHE2YKL130C HER1Q12276 1246 aa2.66□□□□□ -1.98
SHE2YKL130C RPS17AP02407 136 aaKnown RBP2.65□□□□□ -1.99
SHE2YKL130C MSS18P08593 268 aa2.65□□□□□ -1.99
SHE2YKL130C YMR085WP0CF18 432 aa2.65□□□□□ -1.99
SHE2YKL130C RPS17BP14127 136 aaKnown RBP2.65□□□□□ -1.99
SHE2YKL130C MSH1P25846 959 aa2.65□□□□□ -1.99
SHE2YKL130C GSY2P27472 705 aa2.65□□□□□ -1.99
SHE2YKL130C DBF20P32328 564 aa2.65□□□□□ -1.99
SHE2YKL130C DGR2P32330 852 aa2.65□□□□□ -1.99
SHE2YKL130C PET309P32522 965 aaPredicted RBP2.65□□□□□ -1.99
SHE2YKL130C CCT4P39078 528 aaKnown RBP2.65□□□□□ -1.99
SHE2YKL130C YEL025CP39991 1188 aa2.65□□□□□ -1.99
SHE2YKL130C MAF1P41910 395 aa2.65□□□□□ -1.99
SHE2YKL130C ASK10P48361 1146 aa2.65□□□□□ -1.99
SHE2YKL130C TAF4P50105 388 aa2.65□□□□□ -1.99
SHE2YKL130C TEP1P53916 434 aa2.65□□□□□ -1.99
SHE2YKL130C NOP15P53927 220 aaPredicted RBP2.65□□□□□ -1.99
SHE2YKL130C NUP53Q03790 475 aa2.65□□□□□ -1.99
SHE2YKL130C STP4Q07351 490 aa2.65□□□□□ -1.99
SHE2YKL130C RDL1Q12305 139 aaKnown RBP2.65□□□□□ -1.99
SHE2YKL130C YOL114CQ12322 202 aa2.65□□□□□ -1.99
SHE2YKL130C YLR111WQ12528 110 aa2.65□□□□□ -1.99
SHE2YKL130C GLN4P13188 809 aaKnown RBP2.64□□□□□ -1.99
SHE2YKL130C ACO1P19414 778 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
SHE2YKL130C ATP12P22135 325 aa2.64□□□□□ -1.99
SHE2YKL130C MSM1P22438 575 aa2.64□□□□□ -1.99
SHE2YKL130C PHO3P24031 467 aa2.64□□□□□ -1.99
SHE2YKL130C TAF5P38129 798 aa2.64□□□□□ -1.99
SHE2YKL130C ERP2P39704 215 aa2.64□□□□□ -1.99
SHE2YKL130C SSP120P39931 234 aaKnown RBP2.64□□□□□ -1.99
SHE2YKL130C STL1P39932 569 aa2.64□□□□□ -1.99
SHE2YKL130C VID27P40157 782 aa2.64□□□□□ -1.99
SHE2YKL130C YIL092WP40497 633 aa2.64□□□□□ -1.99
SHE2YKL130C VID28P40547 921 aa2.64□□□□□ -1.99
SHE2YKL130C SAP4P53036 818 aa2.64□□□□□ -1.99
SHE2YKL130C RPS15Q01855 142 aaKnown RBP2.64□□□□□ -1.99
SHE2YKL130C YPL071CQ02864 156 aa2.64□□□□□ -1.99
SHE2YKL130C SVL3Q03088 825 aaKnown RBP2.64□□□□□ -1.99
SHE2YKL130C WAR1Q03631 944 aa2.64□□□□□ -1.99
SHE2YKL130C HLR1Q04429 423 aa2.64□□□□□ -1.99
SHE2YKL130C MRPL1Q04599 285 aa2.64□□□□□ -1.99
SHE2YKL130C TPO3Q06451 622 aa2.64□□□□□ -1.99
SHE2YKL130C NGL1Q08213 363 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms