RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	HMG2	P12684	1045 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	MF(ALPHA)2	P32435	120 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	RPC34	P32910	317 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	SER1	P33330	395 aa	Known RBP	4.14	□□□□□ -1.75
SWD2	YKL018W	PTH2	P34222	208 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	GAT1	P43574	510 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	YGR021W	P53212	290 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	MDR1	P53258	950 aa		4.14	□□□□□ -1.75
SWD2	YKL018W	RRP6	Q12149	733 aa	Known RBP	4.14	□□□□□ -1.75
SWD2	YKL018W	RPL7B	Q12213	244 aa	Known RBP	4.14	□□□□□ -1.75
SWD2	YKL018W	YMR084W	A2P2R3	262 aa		4.13	□□□□□ -1.75
SWD2	YKL018W	PMA2	P19657	947 aa		4.13	□□□□□ -1.75
SWD2	YKL018W	YJL193W	P39542	402 aa		4.13	□□□□□ -1.75
SWD2	YKL018W	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
SWD2	YKL018W	NGL1	Q08213	363 aa	Known RBP	4.13	□□□□□ -1.75
SWD2	YKL018W	HOP1	P20050	605 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	RNR3	P21672	869 aa	Known RBP	4.12	□□□□□ -1.75
SWD2	YKL018W	CCL1	P37366	393 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	IES5	P40060	125 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	LRO1	P40345	661 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	HIS6	P40545	261 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	HOL1	P53389	586 aa		4.12	□□□□□ -1.75
SWD2	YKL018W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SWD2	YKL018W	PCK1	P10963	549 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	PHO81	P17442	1178 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	BET2	P20133	325 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	VPS33	P20795	691 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	HXT4	P32467	576 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	APD1	P38281	316 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	ULP2	P40537	1034 aa	Predicted RBP	4.11	□□□□□ -1.75
SWD2	YKL018W	OPT1	P40897	799 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	STP1	Q00947	519 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	ARR3	Q06598	404 aa		4.11	□□□□□ -1.75
SWD2	YKL018W	MTC7	P32633	139 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	RMA1	P36001	430 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	SRP68	P38687	599 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	YHL041W	P38730	149 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	RRP8	P38961	392 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	PSA1	P41940	361 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	RPS15	Q01855	142 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	WAR1	Q03631	944 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	NUR1	Q12066	484 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	NKP1	Q12493	238 aa		4.1	□□□□□ -1.75
SWD2	YKL018W	SEC3	P33332	1336 aa	Known RBP	4.1	□□□□□ -1.75
SWD2	YKL018W	AQY1	P0CD91	305 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	YEL076C-A	P0CX16	216 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	YLR464W	P0CX17	216 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	ATP12	P22135	325 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	MBR1	P23493	339 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	DSS4	P32601	143 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	BEM3	P32873	1128 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	SAW1	P39735	261 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	YEL076C	P39971	216 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	YDL183C	P48569	320 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	SAP4	P53036	818 aa		4.09	□□□□□ -1.75
SWD2	YKL018W	CNM67	P53865	581 aa	Known RBP	4.09	□□□□□ -1.75
SWD2	YKL018W	LEU2	P04173	364 aa	Predicted RBP	4.08	□□□□□ -1.76
SWD2	YKL018W	APA1	P16550	321 aa	Known RBP	4.08	□□□□□ -1.76
SWD2	YKL018W	EXO1	P39875	702 aa		4.08	□□□□□ -1.76
SWD2	YKL018W	SAP185	P40856	1058 aa		4.08	□□□□□ -1.76
SWD2	YKL018W	YFL015C	P43578	164 aa		4.08	□□□□□ -1.76
SWD2	YKL018W	PEF1	P53238	335 aa		4.08	□□□□□ -1.76
SWD2	YKL018W	ERG13	P54839	491 aa	Known RBP	4.08	□□□□□ -1.76
SWD2	YKL018W	TMA64	Q04600	565 aa	Known RBP	4.08	□□□□□ -1.76
SWD2	YKL018W	CWC2	Q12046	339 aa	Predicted RBP	4.08	□□□□□ -1.76
SWD2	YKL018W	YOL114C	Q12322	202 aa		4.08	□□□□□ -1.76
SWD2	YKL018W	BI2	P03873	423 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	YPK1	P12688	680 aa	Known RBP	4.07	□□□□□ -1.76
SWD2	YKL018W	URE2	P23202	354 aa	Known RBP	4.07	□□□□□ -1.76
SWD2	YKL018W	PHO3	P24031	467 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	DBF20	P32328	564 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	YIL092W	P40497	633 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	QRI7	P43122	407 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	SNO3	P43544	222 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	ASK10	P48361	1146 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	USA1	Q03714	838 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	HIM1	Q06674	414 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	PSR2	Q07949	397 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	AHA1	Q12449	350 aa	Known RBP	4.07	□□□□□ -1.76
SWD2	YKL018W	VPS5	Q92331	675 aa		4.07	□□□□□ -1.76
SWD2	YKL018W	MSS18	P08593	268 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	CWH43	P25618	953 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	SSH4	P32343	579 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	EXO84	P38261	753 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	ACA1	P39970	489 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	EAF5	P39995	279 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	VPS27	P40343	622 aa	Known RBP	4.06	□□□□□ -1.76
SWD2	YKL018W	MPS1	P54199	764 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	PSF3	Q12146	194 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	HOS1	Q12214	470 aa		4.06	□□□□□ -1.76
SWD2	YKL018W	AAC1	P04710	309 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	SEC18	P18759	758 aa	Known RBP	4.05	□□□□□ -1.76
SWD2	YKL018W	SDS22	P36047	338 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	STL1	P39932	569 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	NMD5	P46970	1048 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	TEP1	P53916	434 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	CEG1	Q01159	459 aa	Predicted RBP	4.05	□□□□□ -1.76
SWD2	YKL018W	MTD1	Q02046	320 aa	Known RBP	4.05	□□□□□ -1.76
SWD2	YKL018W	ENT2	Q05785	613 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms