RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	UBP7	P40453	1071 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	RRD1	P40454	393 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	RSM25	P40496	264 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	MID1	P41821	548 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	ROK1	P45818	564 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	AIP1	P46680	615 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	NOP9	P47077	666 aa	Known RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	MIG2	P53035	382 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	SAP4	P53036	818 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	YGR067C	P53243	804 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	DIP5	P53388	608 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	ATP25	Q03153	612 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	GNT1	Q12096	491 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	RTN2	Q12443	393 aa		4.62	□□□□□ -1.67
AVT1	YJR001W	NOT5	Q12514	560 aa	Predicted RBP	4.62	□□□□□ -1.67
AVT1	YJR001W	VPS3	P23643	1011 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	ADK2	P26364	225 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	YME2	P32843	850 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	RPT3	P33298	428 aa	Known RBP	4.61	□□□□□ -1.67
AVT1	YJR001W	YKT6	P36015	200 aa	Known RBP	4.61	□□□□□ -1.67
AVT1	YJR001W	UGA2	P38067	497 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	GIP1	P38229	639 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	YBR287W	P38355	427 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	MSR1	P38714	643 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	AIM46	P38885	310 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	LCB2	P40970	561 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	MMM1	P41800	426 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	EPL1	P43572	832 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	LSB1	P53281	241 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	NMA111	P53920	997 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	OAZ1	Q02803	292 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	FMP30	Q02883	468 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	ARO80	Q04052	950 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	DON1	Q05610	365 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
AVT1	YJR001W	NUR1	Q12066	484 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	ADF1	Q2V2Q1	113 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	RPS21B	Q3E754	87 aa	Known RBP	4.61	□□□□□ -1.67
AVT1	YJR001W	BCK1	Q01389	1478 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	RAD9	P14737	1309 aa		4.61	□□□□□ -1.67
AVT1	YJR001W	CTT1	P06115	562 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	PUT4	P15380	627 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	CKA2	P19454	339 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	HCA4	P20448	770 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	DBP5	P20449	482 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	ADP1	P25371	1049 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	FBP26	P32604	452 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SSO1	P32867	290 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	AFR1	P33304	620 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	OAF3	P36023	863 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	CUE2	P36075	443 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	RIO2	P40160	425 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	YIL092W	P40497	633 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	NEO1	P40527	1151 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	MKT1	P40850	830 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	LYS14	P40971	790 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	YJR039W	P47107	1121 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	UBP15	P50101	1230 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	RPN14	P53196	417 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	YNR068C	P53754	272 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	PRO2	P54885	456 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	VPS60	Q03390	229 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	INP2	Q03824	705 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	LCD1	Q04377	747 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	OMS1	Q06668	471 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	DCS2	Q12123	353 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	WTM2	Q12206	467 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	LAT1	P12695	482 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	DBP3	P20447	523 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	CDC10	P25342	322 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	MGM1	P32266	881 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SRB4	P32569	687 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SSE1	P32589	693 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	GYP6	P32806	458 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	MRP4	P32902	394 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	VPS17	P32913	551 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	WHI3	P34761	661 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	FAT1	P38225	669 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SIF2	P38262	535 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	IFA38	P38286	347 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	PEX32	P38292	413 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	OSH3	P38713	996 aa	Known RBP	4.6	□□□□□ -1.67
AVT1	YJR001W	YHR202W	P38887	602 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	CIN4	P39110	191 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	INA22	P40576	216 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SNZ3	P43545	298 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	BNA2	P47125	453 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	CTF18	P49956	741 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SGF73	P53165	657 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	YGR266W	P53326	701 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	RET3	P53600	189 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	SNZ2	P53824	298 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
AVT1	YJR001W	RPC31	P17890	251 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	YCK2	P23292	546 aa	Known RBP	4.59	□□□□□ -1.67
AVT1	YJR001W	PHO3	P24031	467 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	MLF3	P32047	452 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	STE13	P33894	931 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	YKL023W	P36103	277 aa	Known RBP	4.59	□□□□□ -1.67
AVT1	YJR001W	STV1	P37296	890 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms