RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	SET3	P36124	751 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YKR051W	P36142	418 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	HSM3	P38348	480 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YAR028W	P39548	234 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	OSW5	P40219	148 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	VID28	P40547	921 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	THI6	P41835	540 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YGR045C	P53229	120 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	NOG2	P53742	486 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	YNR068C	P53754	272 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	GPD1	Q00055	391 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	ATG38	Q05789	226 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	YLR456W	Q06199	204 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	DBP9	Q06218	594 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	CTI6	Q08923	506 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YPL260W	Q08977	551 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	SKS1	Q12505	502 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	MON2	P48563	1636 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	YRF1-4	O13559	1382 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YLR302C	O13544	120 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
CDC6	YJL194W	RPB4	P20433	221 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	RFA1	P22336	621 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	RRP43	P25359	394 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	MSP1	P28737	362 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	PRO1	P32264	428 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	PGM1	P33401	570 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	MIC60	P36112	540 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YKR078W	P36158	585 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	SSP120	P39931	234 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	EPL1	P43572	832 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	AIP1	P46680	615 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	TOF1	P53840	1238 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	ARP5	P53946	755 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	FDC1	Q03034	503 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	TFC6	Q06339	672 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	YPR196W	Q06595	470 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	RSB1	Q08417	382 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	ALG6	Q12001	544 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	TGL5	Q12043	749 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	RTC5	Q12108	567 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	NSI1	Q12457	570 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	GCD1	P09032	578 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	YEL076C-A	P0CX16	216 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	YLR464W	P0CX17	216 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	PCK1	P10963	549 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	SIR1	P21691	654 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	DBP2	P24783	546 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	PHO84	P25297	587 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	HXT4	P32467	576 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	PRS1	P32895	427 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	NNK1	P36003	928 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	SIF2	P38262	535 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	YEL076C	P39971	216 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	YER158C	P40095	573 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	IRC5	P43610	853 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	ENP2	P48234	707 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	MRX6	P48564	524 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	DSD1	P53095	428 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	LSC1	P53598	329 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	ORC4	P54791	529 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	TRM732	Q03496	1420 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	LUC7	Q07508	261 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	BMS1	Q08965	1183 aa	Known RBP	4.55	□□□□□ -1.68
CDC6	YJL194W	ACM1	Q08981	209 aa		4.55	□□□□□ -1.68
CDC6	YJL194W	YLR358C	O13565	187 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	SUI3	P09064	285 aa	Known RBP	4.54	□□□□□ -1.68
CDC6	YJL194W	SWI6	P09959	803 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	PET123	P17558	318 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	GPT2	P36148	743 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	YBR138C	P38277	524 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	CTM1	P38818	585 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	SEC9	P40357	651 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	ARC1	P46672	376 aa	Known RBP	4.54	□□□□□ -1.68
CDC6	YJL194W	NOP9	P47077	666 aa	Known RBP	4.54	□□□□□ -1.68
CDC6	YJL194W	HXT16	P47185	567 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	PSP1	P50896	841 aa	Known RBP	4.54	□□□□□ -1.68
CDC6	YJL194W	YPL034W	Q03083	165 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	MGR3	Q04472	501 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	SKG3	Q06315	1026 aa		4.54	□□□□□ -1.68
CDC6	YJL194W	LYS21	Q12122	440 aa	Known RBP	4.54	□□□□□ -1.68
CDC6	YJL194W	RPS9A	O13516	197 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	CBS1	P14066	229 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	RIT1	P23796	513 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	SMY1	P32364	656 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	MRP4	P32902	394 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	YUH1	P35127	236 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	YKR018C	P36114	725 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	RPC37	P36121	282 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	DAD2	P36162	133 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	SAF1	P38352	637 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	YHR097C	P38809	366 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	SET5	P38890	526 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	PFK26	P40433	827 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	GYP7	P48365	746 aa		4.53	□□□□□ -1.68
CDC6	YJL194W	NOP15	P53927	220 aa	Predicted RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	DAK1	P54838	584 aa	Known RBP	4.53	□□□□□ -1.68
CDC6	YJL194W	YSA1	Q01976	231 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms