RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCA4	YJL033W	PHO11	P35842	467 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	BIT2	P38346	545 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	PHO12	P38693	467 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	PIG2	P40187	538 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	PIB2	P53191	635 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	FCP1	Q03254	732 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	VMS1	Q04311	632 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	VPS36	Q06696	566 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	CTI6	Q08923	506 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	HFI1	Q12060	488 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	RPS21B	Q3E754	87 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	APM4	Q99186	491 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	RRP5	Q05022	1729 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	RAD50	P12753	1312 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	PRP28	P23394	588 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	PRP22	P24384	1145 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	BCS1	P32839	456 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	YPT7	P32939	208 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	OAF3	P36023	863 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	BIT61	P47041	543 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	GND2	P53319	492 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	NOP15	P53927	220 aa	Predicted RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	SMX3	P54999	86 aa	Predicted RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	PGA3	Q12746	312 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	SUP35	P05453	685 aa	Known RBP	4.2	□□□□□ -1.74
HCA4	YJL033W	KAR3	P17119	729 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	TSR4	P25040	408 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	SEC6	P32844	805 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	OLA1	P38219	394 aa	Known RBP	4.2	□□□□□ -1.74
HCA4	YJL033W	RIO2	P40160	425 aa	Known RBP	4.2	□□□□□ -1.74
HCA4	YJL033W	HOT1	Q03213	719 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	RGC1	Q06108	1083 aa	Known RBP	4.2	□□□□□ -1.74
HCA4	YJL033W	BIK1	P11709	440 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	SIR4	P11978	1358 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	MRP7	P12687	371 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	MTH1	P35198	433 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	NDC80	P40460	691 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	PXA1	P41909	870 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	YPS7	Q06325	596 aa		4.2	□□□□□ -1.74
HCA4	YJL033W	APL5	Q08951	932 aa	Known RBP	4.2	□□□□□ -1.74
HCA4	YJL033W	TY1B-A	O13527	1196 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	RPS17A	P02407	136 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	PET111	P08468	800 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	RPS17B	P14127	136 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	SEC14	P24280	304 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	ARG2	P40360	574 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	DUG1	P43616	481 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	ATG4	P53867	494 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	PPN1	Q04119	674 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	ORM2	Q06144	216 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	IRC10	Q08118	586 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	MLH3	Q12083	715 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	SLM3	Q12093	417 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	CHS5	Q12114	671 aa	Known RBP	4.19	□□□□□ -1.74
HCA4	YJL033W	TY4B-H	P0C2J7	1802 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	TY4B-J	P47024	1803 aa		4.19	□□□□□ -1.74
HCA4	YJL033W	RPS9B	P05755	195 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	CDC43	P18898	376 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	FEN2	P25621	512 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	DUN1	P39009	513 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	SAP1	P39955	897 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	VID28	P40547	921 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	CTR1	P49573	406 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	ADE16	P54113	591 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	RCR2	Q03446	210 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	NDL1	Q06568	189 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	RPS19A	P07280	144 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	RPS19B	P07281	144 aa	Predicted RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	RPS21A	P0C0V8	87 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	ABF1	P14164	731 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	THR1	P17423	357 aa	Known RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	IME1	P21190	360 aa		4.18	□□□□□ -1.74
HCA4	YJL033W	MRH1	Q12117	320 aa	Predicted RBP	4.18	□□□□□ -1.74
HCA4	YJL033W	LPD1	P09624	499 aa	Known RBP	4.17	□□□□□ -1.74
HCA4	YJL033W	KIN3	P22209	435 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	PSO2	P30620	661 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	KTR3	P38130	404 aa	Predicted RBP	4.17	□□□□□ -1.74
HCA4	YJL033W	COS111	P38308	924 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	MAM1	P40065	302 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	YIL077C	P40508	320 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	HYR1	P40581	163 aa	Known RBP	4.17	□□□□□ -1.74
HCA4	YJL033W	IES1	P43579	692 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	SPO19	Q03029	223 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	UBX2	Q04228	584 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	YFT2	Q06676	274 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	STP4	Q07351	490 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	USV1	Q12132	391 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	RMP1	Q12530	201 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	GLN4	P13188	809 aa	Known RBP	4.17	□□□□□ -1.74
HCA4	YJL033W	NTH1	P32356	751 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	EUG1	P32474	517 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	YME2	P32843	850 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	GLG1	P36143	616 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	FAT1	P38225	669 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	BUD8	P41698	603 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	QRI1	P43123	477 aa	Known RBP	4.17	□□□□□ -1.74
HCA4	YJL033W	NSE5	Q03718	556 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	COG4	Q06096	861 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	YOL057W	Q08225	711 aa		4.17	□□□□□ -1.74
HCA4	YJL033W	TRE2	Q08693	809 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms