RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W OPT1P40897 799 aa2.71□□□□□ -1.98
MSL1YIR009W NOP2P40991 618 aaKnown RBP2.71□□□□□ -1.98
MSL1YIR009W GPP1P41277 250 aaKnown RBP2.71□□□□□ -1.98
MSL1YIR009W SCW4P53334 386 aaKnown RBP2.71□□□□□ -1.98
MSL1YIR009W WAR1Q03631 944 aa2.71□□□□□ -1.98
MSL1YIR009W SPN1Q06505 410 aaPredicted RBP2.71□□□□□ -1.98
MSL1YIR009W TRE2Q08693 809 aa2.71□□□□□ -1.98
MSL1YIR009W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
MSL1YIR009W PCL8Q08966 492 aa2.71□□□□□ -1.98
MSL1YIR009W URE2P23202 354 aaKnown RBP2.7□□□□□ -1.98
MSL1YIR009W ASK1P35734 292 aa2.7□□□□□ -1.98
MSL1YIR009W SPC97P38863 823 aa2.7□□□□□ -1.98
MSL1YIR009W OAF1P39720 1047 aaPredicted RBP2.7□□□□□ -1.98
MSL1YIR009W JHD1P40034 492 aa2.7□□□□□ -1.98
MSL1YIR009W PCI8P40512 444 aa2.7□□□□□ -1.98
MSL1YIR009W SAE2P46946 345 aa2.7□□□□□ -1.98
MSL1YIR009W MNN11P46985 422 aaKnown RBP2.7□□□□□ -1.98
MSL1YIR009W ENP2P48234 707 aaKnown RBP2.7□□□□□ -1.98
MSL1YIR009W COG6P53959 839 aa2.7□□□□□ -1.98
MSL1YIR009W YOR378WQ08902 515 aa2.7□□□□□ -1.98
MSL1YIR009W YTM1Q12024 460 aaPredicted RBP2.7□□□□□ -1.98
MSL1YIR009W CRC1Q12289 327 aa2.7□□□□□ -1.98
MSL1YIR009W YAP1P19880 650 aaKnown RBP2.69□□□□□ -1.98
MSL1YIR009W VPS33P20795 691 aa2.69□□□□□ -1.98
MSL1YIR009W TRX2P22803 104 aaKnown RBP2.69□□□□□ -1.98
MSL1YIR009W YJU2P28320 278 aaPredicted RBP2.69□□□□□ -1.98
MSL1YIR009W RMA1P36001 430 aaKnown RBP2.69□□□□□ -1.98
MSL1YIR009W DID4P36108 232 aa2.69□□□□□ -1.98
MSL1YIR009W FUI1P38196 639 aa2.69□□□□□ -1.98
MSL1YIR009W YBR071WP38243 211 aa2.69□□□□□ -1.98
MSL1YIR009W ENP1P38333 483 aaKnown RBP2.69□□□□□ -1.98
MSL1YIR009W YJL193WP39542 402 aa2.69□□□□□ -1.98
MSL1YIR009W YNL034WP53963 612 aa2.69□□□□□ -1.98
MSL1YIR009W PTA1Q01329 785 aaPredicted RBP2.69□□□□□ -1.98
MSL1YIR009W TUF1P02992 437 aaKnown RBP2.68□□□□□ -1.98
MSL1YIR009W AAC1P04710 309 aa2.68□□□□□ -1.98
MSL1YIR009W YMR085WP0CF18 432 aa2.68□□□□□ -1.98
MSL1YIR009W PLC1P32383 869 aa2.68□□□□□ -1.98
MSL1YIR009W DAL3P32459 195 aa2.68□□□□□ -1.98
MSL1YIR009W RGT1P32862 1170 aa2.68□□□□□ -1.98
MSL1YIR009W PXL1P36166 706 aa2.68□□□□□ -1.98
MSL1YIR009W PEA2P40091 420 aa2.68□□□□□ -1.98
MSL1YIR009W HRD3Q05787 833 aa2.68□□□□□ -1.98
MSL1YIR009W SST2P11972 698 aaKnown RBP2.67□□□□□ -1.98
MSL1YIR009W DGR2P32330 852 aa2.67□□□□□ -1.98
MSL1YIR009W HXT4P32467 576 aa2.67□□□□□ -1.98
MSL1YIR009W PEF1P53238 335 aa2.67□□□□□ -1.98
MSL1YIR009W ATG16Q03818 150 aa2.67□□□□□ -1.98
MSL1YIR009W TPO3Q06451 622 aa2.67□□□□□ -1.98
MSL1YIR009W YPR089WO13585 888 aa2.66□□□□□ -1.98
MSL1YIR009W YER190C-BP0CX94 160 aa2.66□□□□□ -1.98
MSL1YIR009W YEL077W-AP0CX95 160 aa2.66□□□□□ -1.98
MSL1YIR009W YGR296C-BP0CX96 160 aa2.66□□□□□ -1.98
MSL1YIR009W YPL283W-BP0CX97 160 aa2.66□□□□□ -1.98
MSL1YIR009W YPR204C-AP0CX98 160 aa2.66□□□□□ -1.98
MSL1YIR009W YPK1P12688 680 aaKnown RBP2.66□□□□□ -1.98
MSL1YIR009W AEP2P22136 580 aa2.66□□□□□ -1.98
MSL1YIR009W DSS4P32601 143 aa2.66□□□□□ -1.98
MSL1YIR009W YIL024CP40543 189 aa2.66□□□□□ -1.98
MSL1YIR009W YNL092WP53934 400 aa2.66□□□□□ -1.98
MSL1YIR009W TGL2P54857 326 aa2.66□□□□□ -1.98
MSL1YIR009W VMS1Q04311 632 aaKnown RBP2.66□□□□□ -1.98
MSL1YIR009W CYK3Q07533 885 aa2.66□□□□□ -1.98
MSL1YIR009W AHA1Q12449 350 aaKnown RBP2.66□□□□□ -1.98
MSL1YIR009W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
MSL1YIR009W YPT1P01123 206 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W ATP4P05626 244 aa2.65□□□□□ -1.99
MSL1YIR009W PCK1P10963 549 aa2.65□□□□□ -1.99
MSL1YIR009W ATP12P22135 325 aa2.65□□□□□ -1.99
MSL1YIR009W PWP2P25635 923 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W CDC5P32562 705 aa2.65□□□□□ -1.99
MSL1YIR009W NIC96P34077 839 aa2.65□□□□□ -1.99
MSL1YIR009W VPS24P36095 224 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W YIL092WP40497 633 aa2.65□□□□□ -1.99
MSL1YIR009W CFD1P40558 293 aa2.65□□□□□ -1.99
MSL1YIR009W SPC105P53148 917 aa2.65□□□□□ -1.99
MSL1YIR009W COP1P53622 1201 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W SQS1P53866 767 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W MET14Q02196 202 aa2.65□□□□□ -1.99
MSL1YIR009W YPL071CQ02864 156 aa2.65□□□□□ -1.99
MSL1YIR009W YDL121CQ07541 149 aa2.65□□□□□ -1.99
MSL1YIR009W NGL1Q08213 363 aaKnown RBP2.65□□□□□ -1.99
MSL1YIR009W HER1Q12276 1246 aa2.65□□□□□ -1.99
MSL1YIR009W RMP1Q12530 201 aa2.65□□□□□ -1.99
MSL1YIR009W GAL1P04385 528 aa2.64□□□□□ -1.99
MSL1YIR009W BET2P20133 325 aa2.64□□□□□ -1.99
MSL1YIR009W MGM1P32266 881 aa2.64□□□□□ -1.99
MSL1YIR009W SER1P33330 395 aaKnown RBP2.64□□□□□ -1.99
MSL1YIR009W NAB3P38996 802 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
MSL1YIR009W YMR124WP39523 943 aaKnown RBP2.64□□□□□ -1.99
MSL1YIR009W IRC7P43623 340 aa2.64□□□□□ -1.99
MSL1YIR009W LSC1P53598 329 aaKnown RBP2.64□□□□□ -1.99
MSL1YIR009W RAD33Q04231 177 aa2.64□□□□□ -1.99
MSL1YIR009W PHM6Q05637 104 aa2.64□□□□□ -1.99
MSL1YIR009W CRT10Q08226 957 aa2.64□□□□□ -1.99
MSL1YIR009W BI2P03873 423 aa2.63□□□□□ -1.99
MSL1YIR009W PIF1P07271 859 aa2.63□□□□□ -1.99
MSL1YIR009W PGI1P12709 554 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W APA1P16550 321 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W GDA1P32621 518 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms