RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W HOS1Q12214 470 aa11.52□□□□□ -0.56
SIM1YIL123W ARP7Q12406 477 aa11.52□□□□□ -0.56
SIM1YIL123W APM4Q99186 491 aa11.52□□□□□ -0.56
SIM1YIL123W PMI40P29952 429 aaKnown RBP11.52□□□□□ -0.57
SIM1YIL123W VPH1P32563 840 aaKnown RBP11.52□□□□□ -0.57
SIM1YIL123W OTU2P38747 307 aaKnown RBP11.52□□□□□ -0.57
SIM1YIL123W LAM1P38851 1228 aa11.52□□□□□ -0.57
SIM1YIL123W OAF1P39720 1047 aaPredicted RBP11.52□□□□□ -0.57
SIM1YIL123W YAT2P40017 923 aa11.52□□□□□ -0.57
SIM1YIL123W EMW1P42842 904 aaKnown RBP11.52□□□□□ -0.57
SIM1YIL123W YJL107CP42947 387 aa11.52□□□□□ -0.57
SIM1YIL123W BIO4P53630 237 aa11.52□□□□□ -0.57
SIM1YIL123W SPG3Q04398 127 aaPredicted RBP11.52□□□□□ -0.57
SIM1YIL123W GRX8Q05926 109 aa11.52□□□□□ -0.57
SIM1YIL123W AAD15Q08361 143 aa11.52□□□□□ -0.57
SIM1YIL123W SLP1Q12232 587 aa11.52□□□□□ -0.57
SIM1YIL123W HRT3Q12347 344 aa11.52□□□□□ -0.57
SIM1YIL123W PMR1P13586 950 aa11.51□□□□□ -0.57
SIM1YIL123W BAS1P22035 811 aa11.51□□□□□ -0.57
SIM1YIL123W ARG1P22768 420 aa11.51□□□□□ -0.57
SIM1YIL123W GID7P25569 745 aa11.51□□□□□ -0.57
SIM1YIL123W UTR2P32623 467 aa11.51□□□□□ -0.57
SIM1YIL123W AIM26P32858 118 aa11.51□□□□□ -0.57
SIM1YIL123W GRS1P38088 690 aaKnown RBP11.51□□□□□ -0.57
SIM1YIL123W HSM3P38348 480 aa11.51□□□□□ -0.57
SIM1YIL123W MAF1P41910 395 aa11.51□□□□□ -0.57
SIM1YIL123W TAF1P46677 1066 aa11.51□□□□□ -0.57
SIM1YIL123W YJL132WP47014 750 aa11.51□□□□□ -0.57
SIM1YIL123W YPL034WQ03083 165 aa11.51□□□□□ -0.57
SIM1YIL123W ADI1Q03677 179 aa11.51□□□□□ -0.57
SIM1YIL123W ARA2Q04212 335 aa11.51□□□□□ -0.57
SIM1YIL123W ATP1P07251 545 aaKnown RBP11.5□□□□□ -0.57
SIM1YIL123W MET16P18408 261 aaPredicted RBP11.5□□□□□ -0.57
SIM1YIL123W KGD2P19262 463 aaPredicted RBP11.5□□□□□ -0.57
SIM1YIL123W AMS1P22855 1083 aa11.5□□□□□ -0.57
SIM1YIL123W YIH1P25637 258 aa11.5□□□□□ -0.57
SIM1YIL123W ADK2P26364 225 aa11.5□□□□□ -0.57
SIM1YIL123W PDB1P32473 366 aaKnown RBP11.5□□□□□ -0.57
SIM1YIL123W DSS4P32601 143 aa11.5□□□□□ -0.57
SIM1YIL123W HSP78P33416 811 aa11.5□□□□□ -0.57
SIM1YIL123W AVT3P36062 692 aa11.5□□□□□ -0.57
SIM1YIL123W PFK26P40433 827 aaKnown RBP11.5□□□□□ -0.57
SIM1YIL123W OPT1P40897 799 aa11.5□□□□□ -0.57
SIM1YIL123W TEP1P53916 434 aa11.5□□□□□ -0.57
SIM1YIL123W SPP1Q03012 353 aa11.5□□□□□ -0.57
SIM1YIL123W PMT7Q06644 662 aa11.5□□□□□ -0.57
SIM1YIL123W MSD1P15179 658 aaKnown RBP11.49□□□□□ -0.57
SIM1YIL123W MRE11P32829 692 aa11.49□□□□□ -0.57
SIM1YIL123W SSP120P39931 234 aaKnown RBP11.49□□□□□ -0.57
SIM1YIL123W ATM1P40416 690 aa11.49□□□□□ -0.57
SIM1YIL123W DPH1P40487 425 aaKnown RBP11.49□□□□□ -0.57
SIM1YIL123W PAN2P53010 1115 aaPredicted RBP11.49□□□□□ -0.57
SIM1YIL123W NUT1P53114 1132 aa11.49□□□□□ -0.57
SIM1YIL123W SPC24Q04477 213 aa11.49□□□□□ -0.57
SIM1YIL123W LEA1Q08963 238 aaPredicted RBP11.49□□□□□ -0.57
SIM1YIL123W PUF2Q12221 1075 aaKnown RBP RIP-Chip data11.49□□□□□ -0.57not detected
SIM1YIL123W RIB2Q12362 591 aaKnown RBP11.49□□□□□ -0.57
SIM1YIL123W HSP60P19882 572 aaKnown RBP11.48□□□□□ -0.57
SIM1YIL123W PRP4P20053 465 aaKnown RBP11.48□□□□□ -0.57
SIM1YIL123W SRP101P32916 621 aa11.48□□□□□ -0.57
SIM1YIL123W COY1P34237 679 aa11.48□□□□□ -0.57
SIM1YIL123W PEX5P35056 612 aa11.48□□□□□ -0.57
SIM1YIL123W YBR056WP38081 501 aa11.48□□□□□ -0.57
SIM1YIL123W YEL028WP39989 153 aa11.48□□□□□ -0.57
SIM1YIL123W YFL012WP43580 148 aa11.48□□□□□ -0.57
SIM1YIL123W RPS10BP46784 105 aaKnown RBP11.48□□□□□ -0.57
SIM1YIL123W VPS25P47142 202 aa11.48□□□□□ -0.57
SIM1YIL123W FOL2P51601 243 aaKnown RBP11.48□□□□□ -0.57
SIM1YIL123W UBX4P54730 416 aa11.48□□□□□ -0.57
SIM1YIL123W CEG1Q01159 459 aaPredicted RBP11.48□□□□□ -0.57
SIM1YIL123W MTD1Q02046 320 aaKnown RBP11.48□□□□□ -0.57
SIM1YIL123W ARP9Q05123 467 aa11.48□□□□□ -0.57
SIM1YIL123W RPS10AQ08745 105 aaPredicted RBP11.48□□□□□ -0.57
SIM1YIL123W SPE4Q12455 300 aa11.48□□□□□ -0.57
SIM1YIL123W YMR085WP0CF18 432 aa11.47□□□□□ -0.57
SIM1YIL123W AAD3P25612 363 aa11.47□□□□□ -0.57
SIM1YIL123W MCM5P29496 775 aaKnown RBP11.47□□□□□ -0.57
SIM1YIL123W SMI1P32566 505 aa11.47□□□□□ -0.57
SIM1YIL123W FUI1P38196 639 aa11.47□□□□□ -0.57
SIM1YIL123W SIF2P38262 535 aa11.47□□□□□ -0.57
SIM1YIL123W EDC3P39998 551 aaKnown RBP11.47□□□□□ -0.57
SIM1YIL123W YNL144CP53907 740 aa11.47□□□□□ -0.57
SIM1YIL123W SLU7Q02775 382 aaKnown RBP11.47□□□□□ -0.57
SIM1YIL123W YML083CQ04526 418 aa11.47□□□□□ -0.57
SIM1YIL123W ECM22Q05958 814 aaPredicted RBP11.47□□□□□ -0.57
SIM1YIL123W HIS1P00498 297 aaKnown RBP11.46□□□□□ -0.57
SIM1YIL123W HEM12P32347 362 aaPredicted RBP11.46□□□□□ -0.57
SIM1YIL123W ECM1P39715 212 aa11.46□□□□□ -0.57
SIM1YIL123W TMA22P47089 198 aaPredicted RBP11.46□□□□□ -0.57
SIM1YIL123W MRX6P48564 524 aa11.46□□□□□ -0.57
SIM1YIL123W COP1P53622 1201 aaKnown RBP11.46□□□□□ -0.57
SIM1YIL123W RCF2P53721 224 aa11.46□□□□□ -0.57
SIM1YIL123W MRN1Q08925 612 aaKnown RBP RIP-Chip data11.46□□□□□ -0.57 RIP-Chip
SIM1YIL123W LCB4Q12246 624 aa11.46□□□□□ -0.57
SIM1YIL123W YPT6Q99260 215 aa11.46□□□□□ -0.57
SIM1YIL123W CAD1P24813 409 aaKnown RBP11.45□□□□□ -0.58
SIM1YIL123W ADY2P25613 283 aa11.45□□□□□ -0.58
SIM1YIL123W MVD1P32377 396 aaKnown RBP11.45□□□□□ -0.58
SIM1YIL123W PEP8P40335 379 aa11.45□□□□□ -0.58
SIM1YIL123W SNG1P46950 547 aa11.45□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms