RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTI1	YGR156W	STP4	Q07351	490 aa		4.12	□□□□□ -1.75
PTI1	YGR156W	NGL1	Q08213	363 aa	Known RBP	4.12	□□□□□ -1.75
PTI1	YGR156W	YOL114C	Q12322	202 aa		4.12	□□□□□ -1.75
PTI1	YGR156W	MMS22	Q06164	1454 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	IRC20	Q06554	1556 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	RPS17A	P02407	136 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	GLN4	P13188	809 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	RPS17B	P14127	136 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	IMG2	P25642	146 aa	Predicted RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	MRS6	P32864	603 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	HOT13	P36078	116 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	EAF5	P39995	279 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	YIL092W	P40497	633 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	ENP2	P48234	707 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	STP1	Q00947	519 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	YDR179W-A	Q03983	463 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	EIS1	Q05050	843 aa	Known RBP	4.11	□□□□□ -1.75
PTI1	YGR156W	ARP7	Q12406	477 aa		4.11	□□□□□ -1.75
PTI1	YGR156W	MSM1	P22438	575 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	YKR075C	P36155	307 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	COS111	P38308	924 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	SSP120	P39931	234 aa	Known RBP	4.1	□□□□□ -1.75
PTI1	YGR156W	STL1	P39932	569 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	SAP185	P40856	1058 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	MAD2	P40958	196 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	PSA1	P41940	361 aa	Known RBP	4.1	□□□□□ -1.75
PTI1	YGR156W	BFA1	P47113	574 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	ASK10	P48361	1146 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	BPL1	P48445	690 aa	Predicted RBP	4.1	□□□□□ -1.75
PTI1	YGR156W	TEP1	P53916	434 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	DAK1	P54838	584 aa	Known RBP	4.1	□□□□□ -1.75
PTI1	YGR156W	TRS130	Q03660	1102 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	NSE5	Q03718	556 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	YFT2	Q06676	274 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	IRC3	Q06683	689 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	VPS36	Q06696	566 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	CWC2	Q12046	339 aa	Predicted RBP	4.1	□□□□□ -1.75
PTI1	YGR156W	DIN7	Q12086	430 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	AI5_ALPHA	Q9ZZX1	630 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	VPS15	P22219	1454 aa		4.1	□□□□□ -1.75
PTI1	YGR156W	KIN82	P25341	720 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	PET127	P32606	800 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	MTC7	P32633	139 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	VID27	P40157	782 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	THI6	P41835	540 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	TAN1	P53072	289 aa	Predicted RBP	4.09	□□□□□ -1.75
PTI1	YGR156W	YML131W	Q03102	365 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	RCR2	Q03446	210 aa	Known RBP	4.09	□□□□□ -1.75
PTI1	YGR156W	YMR210W	Q03649	449 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	VHS3	Q08438	674 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	PSF3	Q12146	194 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	SMC4	Q12267	1418 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	NUP159	P40477	1460 aa		4.09	□□□□□ -1.75
PTI1	YGR156W	RPS9B	P05755	195 aa	Known RBP	4.08	□□□□□ -1.76
PTI1	YGR156W	YEL076C-A	P0CX16	216 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	YLR464W	P0CX17	216 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	FRS1	P15624	595 aa	Known RBP	4.08	□□□□□ -1.76
PTI1	YGR156W	PHO3	P24031	467 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	AAD3	P25612	363 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	DGR2	P32330	852 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	TGL1	P34163	548 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	YEL076C	P39971	216 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	MOT3	P54785	490 aa	Known RBP	4.08	□□□□□ -1.76
PTI1	YGR156W	ARG7	Q04728	441 aa		4.08	□□□□□ -1.76
PTI1	YGR156W	RTK1	Q12100	620 aa	Predicted RBP	4.08	□□□□□ -1.76
PTI1	YGR156W	ADH4	P10127	382 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	PHO81	P17442	1178 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	MBR1	P23493	339 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	SSH4	P32343	579 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	SDS22	P36047	338 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	SPC72	P39723	622 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	BUD8	P41698	603 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	ERR3	P42222	437 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	MNT2	P53059	558 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	PEF1	P53238	335 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	NUR1	Q12066	484 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	TY1B-BR	Q12193	1756 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	TY1B-GR3	Q12316	1755 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	TY1B-OR	Q92393	1755 aa		4.07	□□□□□ -1.76
PTI1	YGR156W	MSH1	P25846	959 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	ELF1	P36053	145 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	YLF2	P38746	405 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	SWD1	P39706	426 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	SAW1	P39735	261 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	SCS2	P40075	244 aa	Known RBP	4.06	□□□□□ -1.76
PTI1	YGR156W	IMA5	P40884	581 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	BIT61	P47041	543 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	TAF4	P50105	388 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	YGL117W	P53133	265 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	CPR8	P53728	308 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	VBA4	Q04602	768 aa	Known RBP	4.06	□□□□□ -1.76
PTI1	YGR156W	TRI1	Q05024	226 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	SSP2	Q08646	371 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	RRI2	Q12348	645 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	VPS5	Q92331	675 aa		4.06	□□□□□ -1.76
PTI1	YGR156W	POL1	P13382	1468 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	SPP41	P38904	1435 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-LR1	P0C2J3	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-F	P0CX63	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-GR2	P0CX64	1770 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms