RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RSC58Q07979 502 aa6.02□□□□□ -1.45
SKN1YGR143W MED2Q12124 431 aa6.02□□□□□ -1.45
SKN1YGR143W RPS17AP02407 136 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W PAB1P04147 577 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SKN1YGR143W CBP6P07253 162 aaPredicted RBP6.02□□□□□ -1.45
SKN1YGR143W RPS17BP14127 136 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W RGP1P16664 663 aa6.02□□□□□ -1.45
SKN1YGR143W RRP43P25359 394 aaPredicted RBP6.02□□□□□ -1.45
SKN1YGR143W VMA6P32366 345 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W YKT6P36015 200 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W CBR1P38626 284 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W GRE3P38715 327 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SKN1YGR143W NPT1P39683 429 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W HXT13P39924 564 aa6.02□□□□□ -1.45
SKN1YGR143W EMP65P40085 556 aa6.02□□□□□ -1.45
SKN1YGR143W NOP9P47077 666 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W BRO1P48582 844 aa6.02□□□□□ -1.45
SKN1YGR143W LSB1P53281 241 aa6.02□□□□□ -1.45
SKN1YGR143W MPS1P54199 764 aa6.02□□□□□ -1.45
SKN1YGR143W ARX1Q03862 593 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W YDR179W-AQ03983 463 aa6.02□□□□□ -1.45
SKN1YGR143W PIG1Q06216 648 aa6.02□□□□□ -1.45
SKN1YGR143W AEP3Q12089 606 aa6.02□□□□□ -1.45
SKN1YGR143W RIB2Q12362 591 aaKnown RBP6.02□□□□□ -1.45
SKN1YGR143W HMS1Q12398 434 aa6.02□□□□□ -1.45
SKN1YGR143W TRP3P00937 484 aa6.01□□□□□ -1.45
SKN1YGR143W SNF1P06782 633 aaKnown RBP6.01□□□□□ -1.45
SKN1YGR143W MBR1P23493 339 aa6.01□□□□□ -1.45
SKN1YGR143W CWH43P25618 953 aa6.01□□□□□ -1.45
SKN1YGR143W EFT1P32324 842 aaKnown RBP6.01□□□□□ -1.45
SKN1YGR143W DBF20P32328 564 aa6.01□□□□□ -1.45
SKN1YGR143W WHI3P34761 661 aaKnown RBP6.01□□□□□ -1.45
SKN1YGR143W PTK1P36002 662 aaPredicted RBP6.01□□□□□ -1.45
SKN1YGR143W YJL171CP46992 396 aa6.01□□□□□ -1.45
SKN1YGR143W NNF1P47149 201 aa6.01□□□□□ -1.45
SKN1YGR143W NSG2P53898 299 aa6.01□□□□□ -1.45
SKN1YGR143W ISU1Q03020 165 aa6.01□□□□□ -1.45
SKN1YGR143W RBS1Q05672 457 aaKnown RBP6.01□□□□□ -1.45
SKN1YGR143W PUS7Q08647 676 aaKnown RBP6.01□□□□□ -1.45
SKN1YGR143W FLO1P32768 1537 aa6.01□□□□□ -1.45
SKN1YGR143W MST1P07236 462 aa6□□□□□ -1.45
SKN1YGR143W RPC40P07703 335 aaKnown RBP6□□□□□ -1.45
SKN1YGR143W RNR2P09938 399 aaKnown RBP6□□□□□ -1.45
SKN1YGR143W SNF3P10870 884 aa6□□□□□ -1.45
SKN1YGR143W REC107P21651 314 aa6□□□□□ -1.45
SKN1YGR143W NIP1P32497 812 aaKnown RBP6□□□□□ -1.45
SKN1YGR143W SQT1P35184 431 aa6□□□□□ -1.45
SKN1YGR143W YHR131CP38835 850 aa6□□□□□ -1.45
SKN1YGR143W SSO2P39926 295 aa6□□□□□ -1.45
SKN1YGR143W GID8P40208 455 aa6□□□□□ -1.45
SKN1YGR143W PDS1P40316 373 aaPredicted RBP6□□□□□ -1.45
SKN1YGR143W PUS6P53294 404 aa6□□□□□ -1.45
SKN1YGR143W REC102Q02721 264 aa6□□□□□ -1.45
SKN1YGR143W SPO20Q04359 397 aa6□□□□□ -1.45
SKN1YGR143W ACK1Q07622 623 aaPredicted RBP6□□□□□ -1.45
SKN1YGR143W ESC8Q08119 714 aa6□□□□□ -1.45
SKN1YGR143W PMT1P33775 817 aa6□□□□□ -1.45
SKN1YGR143W YKR015CP36111 568 aa6□□□□□ -1.45
SKN1YGR143W ECM31P38122 312 aa6□□□□□ -1.45
SKN1YGR143W YBR225WP38321 900 aa6□□□□□ -1.45
SKN1YGR143W GUA1P38625 525 aaKnown RBP6□□□□□ -1.45
SKN1YGR143W BUD6P41697 788 aa6□□□□□ -1.45
SKN1YGR143W LOC1P43586 204 aaPredicted RBP6□□□□□ -1.45
SKN1YGR143W COX16P47081 118 aa6□□□□□ -1.45
SKN1YGR143W UFO1Q04511 668 aa6□□□□□ -1.45
SKN1YGR143W GPN2Q08726 347 aaPredicted RBP6□□□□□ -1.45
SKN1YGR143W PSF3Q12146 194 aa6□□□□□ -1.45
SKN1YGR143W SEM1O94742 89 aa5.99□□□□□ -1.45
SKN1YGR143W YGL041W-AP0C5N3 154 aa5.99□□□□□ -1.45
SKN1YGR143W MRPL33P20084 86 aa5.99□□□□□ -1.45
SKN1YGR143W CDC15P27636 974 aa5.99□□□□□ -1.45
SKN1YGR143W ACH1P32316 526 aa5.99□□□□□ -1.45
SKN1YGR143W CNS1P33313 385 aa5.99□□□□□ -1.45
SKN1YGR143W MTG2P38860 518 aa5.99□□□□□ -1.45
SKN1YGR143W LNP1P38878 278 aa5.99□□□□□ -1.45
SKN1YGR143W BIM1P40013 344 aa5.99□□□□□ -1.45
SKN1YGR143W TOK1P40310 691 aa5.99□□□□□ -1.45
SKN1YGR143W SHQ1P40486 507 aaPredicted RBP5.99□□□□□ -1.45
SKN1YGR143W FYV10P40492 516 aa5.99□□□□□ -1.45
SKN1YGR143W PAC11P40960 533 aa5.99□□□□□ -1.45
SKN1YGR143W STR2P47164 639 aa5.99□□□□□ -1.45
SKN1YGR143W NAS6P50086 228 aa5.99□□□□□ -1.45
SKN1YGR143W HFD1Q04458 532 aa5.99□□□□□ -1.45
SKN1YGR143W GFD1Q04839 188 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W YFT2Q06676 274 aa5.99□□□□□ -1.45
SKN1YGR143W MNL2Q12205 849 aa5.99□□□□□ -1.45
SKN1YGR143W ARP7Q12406 477 aa5.99□□□□□ -1.45
SKN1YGR143W SKM1Q12469 655 aa5.99□□□□□ -1.45
SKN1YGR143W NCB2Q92317 146 aa5.99□□□□□ -1.45
SKN1YGR143W SNA3P14359 133 aa5.99□□□□□ -1.45
SKN1YGR143W DMC1P25453 334 aa5.99□□□□□ -1.45
SKN1YGR143W NAM9P27929 486 aa5.99□□□□□ -1.45
SKN1YGR143W MRS6P32864 603 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W MDL2P33311 773 aa5.99□□□□□ -1.45
SKN1YGR143W SPT10P35208 640 aa5.99□□□□□ -1.45
SKN1YGR143W BMT2P38278 337 aa5.99□□□□□ -1.45
SKN1YGR143W UPF3P48412 387 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W MNP1P53163 194 aaPredicted RBP5.99□□□□□ -1.45
SKN1YGR143W YGR054WP53235 642 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W ALO1P54783 526 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms