RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W ICL2Q12031 575 aa5.32□□□□□ -1.56
DEG1YFL001W BUD4P47136 1447 aa5.32□□□□□ -1.56
DEG1YFL001W SOD2P00447 233 aa5.31□□□□□ -1.56
DEG1YFL001W TRP4P07285 380 aaPredicted RBP5.31□□□□□ -1.56
DEG1YFL001W PRP28P23394 588 aa5.31□□□□□ -1.56
DEG1YFL001W RPS7AP26786 190 aaKnown RBP5.31□□□□□ -1.56
DEG1YFL001W CNS1P33313 385 aa5.31□□□□□ -1.56
DEG1YFL001W YBR053CP38235 358 aa5.31□□□□□ -1.56
DEG1YFL001W YJL193WP39542 402 aa5.31□□□□□ -1.56
DEG1YFL001W RFX1P48743 811 aa5.31□□□□□ -1.56
DEG1YFL001W MUP1P50276 574 aa5.31□□□□□ -1.56
DEG1YFL001W YKU80Q04437 629 aa5.31□□□□□ -1.56
DEG1YFL001W ARR3Q06598 404 aa5.31□□□□□ -1.56
DEG1YFL001W AIM6Q07716 390 aa5.31□□□□□ -1.56
DEG1YFL001W PCD1Q12524 340 aa5.31□□□□□ -1.56
DEG1YFL001W THO2P53552 1597 aaKnown RBP5.3□□□□□ -1.56
DEG1YFL001W CTT1P06115 562 aa5.3□□□□□ -1.56
DEG1YFL001W TPK1P06244 397 aa5.3□□□□□ -1.56
DEG1YFL001W PRE10P21242 288 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
DEG1YFL001W CMK1P27466 446 aaKnown RBP5.3□□□□□ -1.56
DEG1YFL001W LST4P34239 828 aa5.3□□□□□ -1.56
DEG1YFL001W TSA1P34760 196 aaKnown RBP5.3□□□□□ -1.56
DEG1YFL001W BCD1P38772 366 aa5.3□□□□□ -1.56
DEG1YFL001W TMN3P40071 706 aa5.3□□□□□ -1.56
DEG1YFL001W YAP1802P53309 568 aa5.3□□□□□ -1.56
DEG1YFL001W DLT1Q04216 342 aa5.3□□□□□ -1.56
DEG1YFL001W CHS5Q12114 671 aaKnown RBP5.3□□□□□ -1.56
DEG1YFL001W COX17Q12287 69 aa5.3□□□□□ -1.56
DEG1YFL001W SUL2Q12325 893 aa5.3□□□□□ -1.56
DEG1YFL001W MET3P08536 511 aa5.29□□□□□ -1.56
DEG1YFL001W CAF20P12962 161 aaKnown RBP5.29□□□□□ -1.56
DEG1YFL001W MET8P15807 274 aa5.29□□□□□ -1.56
DEG1YFL001W MVD1P32377 396 aaKnown RBP5.29□□□□□ -1.56
DEG1YFL001W MSS1P32559 526 aaPredicted RBP5.29□□□□□ -1.56
DEG1YFL001W STB5P38699 743 aa5.29□□□□□ -1.56
DEG1YFL001W GIP4P39732 760 aa5.29□□□□□ -1.56
DEG1YFL001W SGM1P47166 707 aa5.29□□□□□ -1.56
DEG1YFL001W COS12P53053 380 aa5.29□□□□□ -1.56
DEG1YFL001W YGR054WP53235 642 aaKnown RBP5.29□□□□□ -1.56
DEG1YFL001W RBG2P53295 368 aaKnown RBP5.29□□□□□ -1.56
DEG1YFL001W RVB2Q12464 471 aaKnown RBP5.29□□□□□ -1.56
DEG1YFL001W PET122P10355 254 aa5.28□□□□□ -1.56
DEG1YFL001W STE11P23561 717 aa5.28□□□□□ -1.56
DEG1YFL001W PRE2P30656 287 aaKnown RBP5.28□□□□□ -1.56
DEG1YFL001W YEL025CP39991 1188 aa5.28□□□□□ -1.56
DEG1YFL001W ELO3P40319 345 aa5.28□□□□□ -1.56
DEG1YFL001W UBC11P52492 156 aa5.28□□□□□ -1.56
DEG1YFL001W RIM8P53179 542 aa5.28□□□□□ -1.56
DEG1YFL001W CSL4P53859 292 aaPredicted RBP5.28□□□□□ -1.56
DEG1YFL001W VAM6Q07468 1049 aa5.28□□□□□ -1.56
DEG1YFL001W ZRT2Q12436 422 aa5.28□□□□□ -1.56
DEG1YFL001W SIR3P06701 978 aa5.27□□□□□ -1.57
DEG1YFL001W DSS4P32601 143 aa5.27□□□□□ -1.57
DEG1YFL001W AIM3P38266 947 aaKnown RBP5.27□□□□□ -1.57
DEG1YFL001W UBS1P38290 277 aa5.27□□□□□ -1.57
DEG1YFL001W HRB1P38922 454 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
DEG1YFL001W VTC2P43585 828 aa5.27□□□□□ -1.57
DEG1YFL001W IRC6P43615 237 aa5.27□□□□□ -1.57
DEG1YFL001W SIP4P46954 829 aa5.27□□□□□ -1.57
DEG1YFL001W MPS3P47069 682 aa5.27□□□□□ -1.57
DEG1YFL001W BUL1P48524 976 aa5.27□□□□□ -1.57
DEG1YFL001W BSC5P53755 489 aa5.27□□□□□ -1.57
DEG1YFL001W YPL108WQ02872 168 aaPredicted RBP5.27□□□□□ -1.57
DEG1YFL001W TDA9Q04545 1251 aa5.27□□□□□ -1.57
DEG1YFL001W TMA10Q06177 86 aa5.27□□□□□ -1.57
DEG1YFL001W CDA2Q06703 312 aa5.27□□□□□ -1.57
DEG1YFL001W IZH3Q07959 543 aa5.27□□□□□ -1.57
DEG1YFL001W REV3P14284 1504 aa5.27□□□□□ -1.57
DEG1YFL001W TY2A-LR1P0C2J4 438 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-FP0CX61 438 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-GR2P0CX62 438 aa5.26□□□□□ -1.57
DEG1YFL001W VPS34P22543 875 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-CP25383 438 aa5.26□□□□□ -1.57
DEG1YFL001W NTH1P32356 751 aa5.26□□□□□ -1.57
DEG1YFL001W ESL2P36168 1195 aa5.26□□□□□ -1.57
DEG1YFL001W RKM3P38222 552 aa5.26□□□□□ -1.57
DEG1YFL001W KHA1P40309 873 aa5.26□□□□□ -1.57
DEG1YFL001W YJR061WP40355 935 aa5.26□□□□□ -1.57
DEG1YFL001W LYS14P40971 790 aa5.26□□□□□ -1.57
DEG1YFL001W IDS2P46958 469 aa5.26□□□□□ -1.57
DEG1YFL001W COG1P53079 417 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-DR2Q03483 438 aa5.26□□□□□ -1.57
DEG1YFL001W HOF1Q05080 669 aa5.26□□□□□ -1.57
DEG1YFL001W NBP2Q12163 236 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-BQ12260 438 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-OR2Q12293 438 aa5.26□□□□□ -1.57
DEG1YFL001W SCM3Q12334 223 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-DR1Q12392 438 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-OR1Q12439 438 aa5.26□□□□□ -1.57
DEG1YFL001W SKM1Q12469 655 aa5.26□□□□□ -1.57
DEG1YFL001W TY2A-DR3Q99303 438 aa5.26□□□□□ -1.57
DEG1YFL001W RPL19AP0CX82 189 aaKnown RBP5.25□□□□□ -1.57
DEG1YFL001W RPL19BP0CX83 189 aaPredicted RBP5.25□□□□□ -1.57
DEG1YFL001W OLE1P21147 510 aaKnown RBP5.25□□□□□ -1.57
DEG1YFL001W DHR2P36009 735 aaPredicted RBP5.25□□□□□ -1.57
DEG1YFL001W NOP4P37838 685 aaKnown RBP5.25□□□□□ -1.57
DEG1YFL001W CTP1P38152 299 aa5.25□□□□□ -1.57
DEG1YFL001W REV7P38927 245 aa5.25□□□□□ -1.57
DEG1YFL001W ARB1P40024 610 aaKnown RBP5.25□□□□□ -1.57
DEG1YFL001W IST3P40565 148 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms