RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W VTC2P43585 828 aa5.49□□□□□ -1.53
UBP9YER098W CPR6P53691 371 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W MRPL13Q02204 264 aa5.49□□□□□ -1.53
UBP9YER098W SPC19Q03954 165 aa5.49□□□□□ -1.53
UBP9YER098W KRE28Q04431 385 aa5.49□□□□□ -1.53
UBP9YER098W YKU80Q04437 629 aa5.49□□□□□ -1.53
UBP9YER098W YOR389WQ08912 624 aa5.49□□□□□ -1.53
UBP9YER098W LEU2P04173 364 aaPredicted RBP5.48□□□□□ -1.53
UBP9YER098W CMP2P14747 604 aa5.48□□□□□ -1.53
UBP9YER098W YCL049CP25577 312 aa5.48□□□□□ -1.53
UBP9YER098W MET22P32179 357 aa5.48□□□□□ -1.53
UBP9YER098W TFC3P34111 1160 aa5.48□□□□□ -1.53
UBP9YER098W ECM4P36156 370 aa5.48□□□□□ -1.53
UBP9YER098W YSW1P38280 609 aa5.48□□□□□ -1.53
UBP9YER098W UPF3P48412 387 aaKnown RBP5.48□□□□□ -1.53
UBP9YER098W YPT11P48559 417 aa5.48□□□□□ -1.53
UBP9YER098W MAL13P53338 473 aa5.48□□□□□ -1.53
UBP9YER098W TLG1Q03322 224 aa5.48□□□□□ -1.53
UBP9YER098W YMR210WQ03649 449 aa5.48□□□□□ -1.53
UBP9YER098W YPS7Q06325 596 aa5.48□□□□□ -1.53
UBP9YER098W SNF1P06782 633 aaKnown RBP5.48□□□□□ -1.53
UBP9YER098W NUC1P08466 329 aa5.48□□□□□ -1.53
UBP9YER098W GUK1P15454 187 aaKnown RBP5.48□□□□□ -1.53
UBP9YER098W CBP3P21560 335 aa5.48□□□□□ -1.53
UBP9YER098W IMG2P25642 146 aaPredicted RBP5.48□□□□□ -1.53
UBP9YER098W DGR2P32330 852 aa5.48□□□□□ -1.53
UBP9YER098W KAR9P32526 644 aa5.48□□□□□ -1.53
UBP9YER098W PAH1P32567 862 aa5.48□□□□□ -1.53
UBP9YER098W MIP6P38760 659 aaKnown RBP5.48□□□□□ -1.53
UBP9YER098W SMF1P38925 575 aa5.48□□□□□ -1.53
UBP9YER098W AXL2P38928 823 aa5.48□□□□□ -1.53
UBP9YER098W DUN1P39009 513 aa5.48□□□□□ -1.53
UBP9YER098W ACO2P39533 789 aa5.48□□□□□ -1.53
UBP9YER098W VIP1Q06685 1146 aaKnown RBP5.48□□□□□ -1.53
UBP9YER098W RTK1Q12100 620 aaPredicted RBP5.48□□□□□ -1.53
UBP9YER098W MTF2P10849 440 aa5.47□□□□□ -1.53
UBP9YER098W MF(ALPHA)2P32435 120 aa5.47□□□□□ -1.53
UBP9YER098W YEL068CP39977 110 aa5.47□□□□□ -1.53
UBP9YER098W DPH1P40487 425 aaKnown RBP5.47□□□□□ -1.53
UBP9YER098W BOP3P53958 396 aa5.47□□□□□ -1.53
UBP9YER098W MFM1Q02783 413 aa5.47□□□□□ -1.53
UBP9YER098W VPS38Q05919 439 aa5.47□□□□□ -1.53
UBP9YER098W MMR1Q06324 491 aa5.47□□□□□ -1.53
UBP9YER098W BCK1Q01389 1478 aa5.47□□□□□ -1.53
UBP9YER098W ADE6P38972 1358 aaKnown RBP5.47□□□□□ -1.53
UBP9YER098W PHO5P00635 467 aa5.46□□□□□ -1.53
UBP9YER098W IME1P21190 360 aa5.46□□□□□ -1.53
UBP9YER098W WHI3P34761 661 aaKnown RBP5.46□□□□□ -1.53
UBP9YER098W SSY5P47002 699 aa5.46□□□□□ -1.53
UBP9YER098W ADA2Q02336 434 aa5.46□□□□□ -1.53
UBP9YER098W FAR8Q05040 523 aa5.46□□□□□ -1.53
UBP9YER098W VID22Q05934 901 aa5.46□□□□□ -1.53
UBP9YER098W YLR177WQ06251 628 aa5.46□□□□□ -1.53
UBP9YER098W ARR1Q06596 294 aa5.46□□□□□ -1.53
UBP9YER098W BRE4Q07660 1125 aa5.46□□□□□ -1.53
UBP9YER098W RIB2Q12362 591 aaKnown RBP5.46□□□□□ -1.53
UBP9YER098W PGA3Q12746 312 aaKnown RBP5.46□□□□□ -1.53
UBP9YER098W APL1P27351 700 aa5.46□□□□□ -1.54
UBP9YER098W YEL043WP32618 956 aa5.46□□□□□ -1.54
UBP9YER098W AIM26P32858 118 aa5.46□□□□□ -1.54
UBP9YER098W BUD2P33314 1104 aa5.46□□□□□ -1.54
UBP9YER098W YGR012WP53206 393 aa5.46□□□□□ -1.54
UBP9YER098W ASM4Q05166 528 aa5.46□□□□□ -1.54
UBP9YER098W CDA1Q06702 301 aa5.46□□□□□ -1.54
UBP9YER098W IMH1Q06704 911 aaKnown RBP5.46□□□□□ -1.54
UBP9YER098W YPL150WQ12152 901 aa5.46□□□□□ -1.54
UBP9YER098W NUP188P52593 1655 aaKnown RBP5.46□□□□□ -1.54
UBP9YER098W TPM1P17536 199 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W OPI1P21957 404 aa5.45□□□□□ -1.54
UBP9YER098W MCM3P24279 971 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W PIH1P38768 344 aa5.45□□□□□ -1.54
UBP9YER098W BCD1P38772 366 aa5.45□□□□□ -1.54
UBP9YER098W STT3P39007 718 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W NOP16P40007 231 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W VHR1P40522 640 aa5.45□□□□□ -1.54
UBP9YER098W SET2P46995 733 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W RRT6P53117 311 aaPredicted RBP5.45□□□□□ -1.54
UBP9YER098W ZPR1P53303 486 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W NCS2P53923 493 aaPredicted RBP5.45□□□□□ -1.54
UBP9YER098W INP2Q03824 705 aa5.45□□□□□ -1.54
UBP9YER098W TRM8Q12009 286 aa5.45□□□□□ -1.54
UBP9YER098W PHM7Q12252 991 aa5.45□□□□□ -1.54
UBP9YER098W HSF1P10961 833 aa5.45□□□□□ -1.54
UBP9YER098W MRP7P12687 371 aa5.45□□□□□ -1.54
UBP9YER098W PHO13P19881 312 aa5.45□□□□□ -1.54
UBP9YER098W PAP1P29468 568 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W MCM4P30665 933 aaKnown RBP5.45□□□□□ -1.54
UBP9YER098W GCD7P32502 381 aaPredicted RBP5.45□□□□□ -1.54
UBP9YER098W RAD5P32849 1169 aaPredicted RBP5.45□□□□□ -1.54
UBP9YER098W ABZ1P37254 787 aaPredicted RBP5.45□□□□□ -1.54
UBP9YER098W IFA38P38286 347 aa5.45□□□□□ -1.54
UBP9YER098W PSF2P40359 213 aa5.45□□□□□ -1.54
UBP9YER098W INA22P40576 216 aa5.45□□□□□ -1.54
UBP9YER098W MAD2P40958 196 aa5.45□□□□□ -1.54
UBP9YER098W MMM1P41800 426 aa5.45□□□□□ -1.54
UBP9YER098W MRPS35P53292 345 aa5.45□□□□□ -1.54
UBP9YER098W POL3P15436 1097 aa5.44□□□□□ -1.54
UBP9YER098W ACO1P19414 778 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
UBP9YER098W TOA1P32773 286 aa5.44□□□□□ -1.54
UBP9YER098W NUP120P35729 1037 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms