RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W PLC1P32383 869 aa3.93□□□□□ -1.78
RSM28YDR494W ENP1P38333 483 aaKnown RBP3.93□□□□□ -1.78
RSM28YDR494W SRP68P38687 599 aaKnown RBP3.93□□□□□ -1.78
RSM28YDR494W OPT1P40897 799 aa3.93□□□□□ -1.78
RSM28YDR494W MEP2P41948 499 aa3.93□□□□□ -1.78
RSM28YDR494W TDA10P42938 290 aa3.93□□□□□ -1.78
RSM28YDR494W SQS1P53866 767 aaKnown RBP3.93□□□□□ -1.78
RSM28YDR494W YEL076C-AP0CX16 216 aa3.92□□□□□ -1.78
RSM28YDR494W YLR464WP0CX17 216 aa3.92□□□□□ -1.78
RSM28YDR494W TOM20P35180 183 aa3.92□□□□□ -1.78
RSM28YDR494W YEL076CP39971 216 aa3.92□□□□□ -1.78
RSM28YDR494W HOL1P53389 586 aa3.92□□□□□ -1.78
RSM28YDR494W IDP3P53982 420 aaKnown RBP3.92□□□□□ -1.78
RSM28YDR494W WAR1Q03631 944 aa3.92□□□□□ -1.78
RSM28YDR494W ECM38Q05902 660 aaPredicted RBP3.92□□□□□ -1.78
RSM28YDR494W PEX15Q08215 383 aa3.92□□□□□ -1.78
RSM28YDR494W CWC2Q12046 339 aaPredicted RBP3.92□□□□□ -1.78
RSM28YDR494W RDL1Q12305 139 aaKnown RBP3.92□□□□□ -1.78
RSM28YDR494W YLR111WQ12528 110 aa3.92□□□□□ -1.78
RSM28YDR494W URE2P23202 354 aaKnown RBP3.91□□□□□ -1.78
RSM28YDR494W MNT3P40549 630 aa3.91□□□□□ -1.78
RSM28YDR494W IRC5P43610 853 aa3.91□□□□□ -1.78
RSM28YDR494W PHM6Q05637 104 aa3.91□□□□□ -1.78
RSM28YDR494W PCL8Q08966 492 aa3.91□□□□□ -1.78
RSM28YDR494W RMA1P36001 430 aaKnown RBP3.9□□□□□ -1.79
RSM28YDR494W YJL193WP39542 402 aa3.9□□□□□ -1.79
RSM28YDR494W JHD1P40034 492 aa3.9□□□□□ -1.79
RSM28YDR494W PCI8P40512 444 aa3.9□□□□□ -1.79
RSM28YDR494W SAE2P46946 345 aa3.9□□□□□ -1.79
RSM28YDR494W MDR1P53258 950 aa3.9□□□□□ -1.79
RSM28YDR494W SCW4P53334 386 aaKnown RBP3.9□□□□□ -1.79
RSM28YDR494W SPN1Q06505 410 aaPredicted RBP3.9□□□□□ -1.79
RSM28YDR494W YOR378WQ08902 515 aa3.9□□□□□ -1.79
RSM28YDR494W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
RSM28YDR494W TUF1P02992 437 aaKnown RBP3.89□□□□□ -1.79
RSM28YDR494W VPS33P20795 691 aa3.89□□□□□ -1.79
RSM28YDR494W ASK1P35734 292 aa3.89□□□□□ -1.79
RSM28YDR494W SPC97P38863 823 aa3.89□□□□□ -1.79
RSM28YDR494W EAF5P39995 279 aa3.89□□□□□ -1.79
RSM28YDR494W MTD1Q02046 320 aaKnown RBP3.89□□□□□ -1.79
RSM28YDR494W CRC1Q12289 327 aa3.89□□□□□ -1.79
RSM28YDR494W VPS5Q92331 675 aa3.89□□□□□ -1.79
RSM28YDR494W AAC1P04710 309 aa3.88□□□□□ -1.79
RSM28YDR494W YJU2P28320 278 aaPredicted RBP3.88□□□□□ -1.79
RSM28YDR494W PEF1P53238 335 aa3.88□□□□□ -1.79
RSM28YDR494W SLX4Q12098 748 aa3.88□□□□□ -1.79
RSM28YDR494W YAP1P19880 650 aaKnown RBP3.87□□□□□ -1.79
RSM28YDR494W CWH43P25618 953 aa3.87□□□□□ -1.79
RSM28YDR494W GRX7P38068 203 aa3.87□□□□□ -1.79
RSM28YDR494W STL1P39932 569 aa3.87□□□□□ -1.79
RSM28YDR494W SND1Q04007 877 aa3.87□□□□□ -1.79
RSM28YDR494W HRD3Q05787 833 aa3.87□□□□□ -1.79
RSM28YDR494W TPO3Q06451 622 aa3.87□□□□□ -1.79
RSM28YDR494W TMA7Q3E764 64 aaKnown RBP3.87□□□□□ -1.79
RSM28YDR494W YMR085WP0CF18 432 aa3.86□□□□□ -1.79
RSM28YDR494W PCK1P10963 549 aa3.86□□□□□ -1.79
RSM28YDR494W SEC12P11655 471 aa3.86□□□□□ -1.79
RSM28YDR494W YPK1P12688 680 aaKnown RBP3.86□□□□□ -1.79
RSM28YDR494W PXL1P36166 706 aa3.86□□□□□ -1.79
RSM28YDR494W YIL092WP40497 633 aa3.86□□□□□ -1.79
RSM28YDR494W MNT2P53059 558 aa3.86□□□□□ -1.79
RSM28YDR494W PEX8P53248 589 aa3.86□□□□□ -1.79
RSM28YDR494W YNL034WP53963 612 aa3.86□□□□□ -1.79
RSM28YDR494W HOS1Q12214 470 aa3.86□□□□□ -1.79
RSM28YDR494W DSS4P32601 143 aa3.85□□□□□ -1.79
RSM28YDR494W RGT1P32862 1170 aa3.85□□□□□ -1.79
RSM28YDR494W YPL071CQ02864 156 aa3.85□□□□□ -1.79
RSM28YDR494W NUR1Q12066 484 aa3.85□□□□□ -1.79
RSM28YDR494W RTK1Q12100 620 aaPredicted RBP3.85□□□□□ -1.79
RSM28YDR494W PSF3Q12146 194 aa3.85□□□□□ -1.79
RSM28YDR494W AHA1Q12449 350 aaKnown RBP3.85□□□□□ -1.79
RSM28YDR494W MPD2Q99316 277 aa3.85□□□□□ -1.79
RSM28YDR494W YPR089WO13585 888 aa3.84□□□□□ -1.79
RSM28YDR494W YER190C-BP0CX94 160 aa3.84□□□□□ -1.79
RSM28YDR494W YEL077W-AP0CX95 160 aa3.84□□□□□ -1.79
RSM28YDR494W YGR296C-BP0CX96 160 aa3.84□□□□□ -1.79
RSM28YDR494W YPL283W-BP0CX97 160 aa3.84□□□□□ -1.79
RSM28YDR494W YPR204C-AP0CX98 160 aa3.84□□□□□ -1.79
RSM28YDR494W BET2P20133 325 aa3.84□□□□□ -1.79
RSM28YDR494W PHO3P24031 467 aa3.84□□□□□ -1.79
RSM28YDR494W PET309P32522 965 aaPredicted RBP3.84□□□□□ -1.79
RSM28YDR494W SAW1P39735 261 aa3.84□□□□□ -1.79
RSM28YDR494W SSP120P39931 234 aaKnown RBP3.84□□□□□ -1.79
RSM28YDR494W YIL024CP40543 189 aa3.84□□□□□ -1.79
RSM28YDR494W CYK3Q07533 885 aa3.84□□□□□ -1.79
RSM28YDR494W URA3P03962 267 aa3.83□□□□□ -1.8
RSM28YDR494W ARG1P22768 420 aa3.83□□□□□ -1.8
RSM28YDR494W CDC5P32562 705 aa3.83□□□□□ -1.8
RSM28YDR494W SDS22P36047 338 aa3.83□□□□□ -1.8
RSM28YDR494W SCS2P40075 244 aaKnown RBP3.83□□□□□ -1.8
RSM28YDR494W MAD2P40958 196 aa3.83□□□□□ -1.8
RSM28YDR494W IRC7P43623 340 aa3.83□□□□□ -1.8
RSM28YDR494W YNR071CP53757 342 aa3.83□□□□□ -1.8
RSM28YDR494W YNL092WP53934 400 aa3.83□□□□□ -1.8
RSM28YDR494W TGL2P54857 326 aa3.83□□□□□ -1.8
RSM28YDR494W DIN7Q12086 430 aa3.83□□□□□ -1.8
RSM28YDR494W HER1Q12276 1246 aa3.83□□□□□ -1.8
RSM28YDR494W BI2P03873 423 aa3.82□□□□□ -1.8
RSM28YDR494W NIC96P34077 839 aa3.82□□□□□ -1.8
RSM28YDR494W TGL1P34163 548 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms