RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	DNM1	P54861	757 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	MTD1	Q02046	320 aa	Known RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	LEE1	Q02799	301 aa	Known RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	NTG2	Q08214	380 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	CRT10	Q08226	957 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	YLR125W	Q12138	136 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	TIP41	Q12199	356 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	HSL1	P34244	1518 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	STU1	P38198	1513 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	CET1	O13297	549 aa	Predicted RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	LSB5	P25369	354 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	YEN1	P40028	759 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	SAP4	P53036	818 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	MAL11	P53048	616 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	YGL081W	P53156	320 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	SNU56	Q03782	492 aa	Known RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	UTP14	Q04500	899 aa	Known RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	NOP14	Q99207	810 aa	Known RBP	0.98	□□□□□ -2.25
SEC1	YDR164C	BUD4	P47136	1447 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	HIR3	P47171	1648 aa		0.98	□□□□□ -2.25
SEC1	YDR164C	AAC1	P04710	309 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	CDC9	P04819	755 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	RPL8A	P17076	256 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	HOP1	P20050	605 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	IMG2	P25642	146 aa	Predicted RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	MSH2	P25847	964 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	YPT7	P32939	208 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	EXO84	P38261	753 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	ENP1	P38333	483 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	PAF1	P38351	445 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	GND1	P38720	489 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	NUG1	P40010	520 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	YIL152W	P40455	235 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	PAP2	P53632	584 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	YNR029C	P53729	429 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	YNL144C	P53907	740 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	CRZ1	P53968	678 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	YMR034C	Q05131	434 aa	Predicted RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	HRD3	Q05787	833 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	YOL057W	Q08225	711 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	YOR389W	Q08912	624 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	SWR1	Q05471	1514 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	ADR1	P07248	1323 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	TUF1	P02992	437 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	MEF1	P25039	761 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	SWE1	P32944	819 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	BZZ1	P38822	633 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	FAA2	P39518	744 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	LAS21	P40367	830 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	TFB2	Q02939	513 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	MLH2	Q07980	695 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	GPN2	Q08726	347 aa	Predicted RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	TAH18	Q12181	623 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	GIN4	Q12263	1142 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	MDM12	Q92328	271 aa		0.97	□□□□□ -2.25
SEC1	YDR164C	PNO1	Q99216	274 aa	Known RBP	0.97	□□□□□ -2.25
SEC1	YDR164C	IKI3	Q06706	1349 aa	Known RBP	0.96	□□□□□ -2.26
SEC1	YDR164C	SCC2	Q04002	1493 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	BET2	P20133	325 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	BEM4	P39011	633 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	TPM2	P40414	161 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	YJR120W	P47157	116 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	GPG1	P53130	126 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	FOL1	P53848	824 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	UGO1	Q03327	502 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	NSE5	Q03718	556 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	ECM22	Q05958	814 aa	Predicted RBP	0.96	□□□□□ -2.26
SEC1	YDR164C	YLR001C	Q07895	862 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	RSA1	Q08932	381 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	BPT1	P14772	1559 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	TOM1	Q03280	3268 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	UFD4	P33202	1483 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	REV3	P14284	1504 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	SRD1	P09007	221 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	PCK1	P10963	549 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	SEC12	P11655	471 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	REV1	P12689	985 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	DAL5	P15365	543 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
SEC1	YDR164C	MRC1	P25588	1096 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	YKU70	P32807	602 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	FTH1	P38310	465 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	TAF4	P50105	388 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	SHE10	P53075	577 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	YRB30	P53107	440 aa	Predicted RBP	0.96	□□□□□ -2.26
SEC1	YDR164C	PEX8	P53248	589 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	YNL193W	P53870	558 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	BET4	Q00618	327 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	PDS5	Q04264	1277 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	TMA17	Q12513	150 aa		0.96	□□□□□ -2.26
SEC1	YDR164C	YPK1	P12688	680 aa	Known RBP	0.95	□□□□□ -2.26
SEC1	YDR164C	MIH1	P23748	554 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	SFP1	P32432	683 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	TYS1	P36421	394 aa	Known RBP	0.95	□□□□□ -2.26
SEC1	YDR164C	GRX7	P38068	203 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	MKT1	P40850	830 aa	Known RBP	0.95	□□□□□ -2.26
SEC1	YDR164C	BUD8	P41698	603 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	HLJ1	P48353	224 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	YPT11	P48559	417 aa		0.95	□□□□□ -2.26
SEC1	YDR164C	YGR237C	P50089	785 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms