RNA–Protein interactions for RNA: YDR155C

CPR1, Transcript of Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR1, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR1	YDR155C	SEC15	P22224	910 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	PRP22	P24384	1145 aa	Known RBP	4.98	□□□□□ -1.61
CPR1	YDR155C	GLG1	P36143	616 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	COS111	P38308	924 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	YJL206C	P39529	758 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	BUD8	P41698	603 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	IES1	P43579	692 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	RFX1	P48743	811 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	YVH1	Q02256	364 aa	Known RBP	4.98	□□□□□ -1.61
CPR1	YDR155C	UBX2	Q04228	584 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	PDS5	Q04264	1277 aa		4.98	□□□□□ -1.61
CPR1	YDR155C	FLO11	P08640	1367 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	DMC1	P25453	334 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	SET3	P36124	751 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	DUN1	P39009	513 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	DUG1	P43616	481 aa	Known RBP	4.97	□□□□□ -1.61
CPR1	YDR155C	MPS3	P47069	682 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	VPS73	P53142	486 aa	Known RBP	4.97	□□□□□ -1.61
CPR1	YDR155C	RPT4	P53549	437 aa	Known RBP	4.97	□□□□□ -1.61
CPR1	YDR155C	ZDS2	P54786	942 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	PPN1	Q04119	674 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	VPS13	Q07878	3144 aa		4.97	□□□□□ -1.61
CPR1	YDR155C	GLN4	P13188	809 aa	Known RBP	4.96	□□□□□ -1.62
CPR1	YDR155C	ABF1	P14164	731 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	GFA1	P14742	717 aa	Known RBP	4.96	□□□□□ -1.62
CPR1	YDR155C	MSS1	P32559	526 aa	Predicted RBP	4.96	□□□□□ -1.62
CPR1	YDR155C	CTP1	P38152	299 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	TDP1	P38319	544 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	BDH2	P39713	417 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	KHA1	P40309	873 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	YGR151C	P53287	111 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	SUT2	Q12286	268 aa		4.96	□□□□□ -1.62
CPR1	YDR155C	LYS2	P07702	1392 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	FUB1	P25659	250 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	RPS7A	P26786	190 aa	Known RBP	4.95	□□□□□ -1.62
CPR1	YDR155C	KRE2	P27809	442 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	EUG1	P32474	517 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	YHR097C	P38809	366 aa	Known RBP	4.95	□□□□□ -1.62
CPR1	YDR155C	VID28	P40547	921 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	TAH11	P47112	604 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	NSE5	Q03718	556 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	YDL086W	Q07505	273 aa		4.95	□□□□□ -1.62
CPR1	YDR155C	CDC26	P14724	124 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	TSR4	P25040	408 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	NTH1	P32356	751 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	DAL3	P32459	195 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	GPP2	P40106	250 aa	Known RBP	4.94	□□□□□ -1.62
CPR1	YDR155C	PSF2	P40359	213 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	TAF4	P50105	388 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	SPO1	P53541	631 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	FCP1	Q03254	732 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	PRP42	Q03776	544 aa	Known RBP	4.94	□□□□□ -1.62
CPR1	YDR155C	YPR117W	Q06116	2489 aa		4.94	□□□□□ -1.62
CPR1	YDR155C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CPR1	YDR155C	HCA4	P20448	770 aa	Known RBP	4.93	□□□□□ -1.62
CPR1	YDR155C	PRE4	P30657	266 aa		4.93	□□□□□ -1.62
CPR1	YDR155C	MF(ALPHA)2	P32435	120 aa		4.93	□□□□□ -1.62
CPR1	YDR155C	GMH1	P36125	273 aa		4.93	□□□□□ -1.62
CPR1	YDR155C	KSP1	P38691	1029 aa	Known RBP	4.93	□□□□□ -1.62
CPR1	YDR155C	YSH1	Q06224	779 aa	Predicted RBP	4.93	□□□□□ -1.62
CPR1	YDR155C	IZH3	Q07959	543 aa		4.93	□□□□□ -1.62
CPR1	YDR155C	YIL166C	P40445	542 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	ENP2	P48234	707 aa	Known RBP	4.92	□□□□□ -1.62
CPR1	YDR155C	YNL050C	P53952	270 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	SKY1	Q03656	742 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	THI3	Q07471	609 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	BMS1	Q08965	1183 aa	Known RBP	4.92	□□□□□ -1.62
CPR1	YDR155C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
CPR1	YDR155C	TMA17	Q12513	150 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	RMP1	Q12530	201 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	DUR1,2	P32528	1835 aa	Known RBP	4.92	□□□□□ -1.62
CPR1	YDR155C	FLO1	P32768	1537 aa		4.92	□□□□□ -1.62
CPR1	YDR155C	AEP2	P22136	580 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	MGM1	P32266	881 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	EMP70	P32802	667 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	CRG1	P38892	291 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
CPR1	YDR155C	NIT2	P47016	307 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	RNR4	P49723	345 aa	Known RBP	4.91	□□□□□ -1.62
CPR1	YDR155C	NMA2	P53204	395 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	TRE2	Q08693	809 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	YPR027C	Q12079	277 aa		4.91	□□□□□ -1.62
CPR1	YDR155C	YMR084W	A2P2R3	262 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
CPR1	YDR155C	DGR2	P32330	852 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	HXT4	P32467	576 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	APL3	P38065	1025 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	CDS1	P38221	457 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	YBR071W	P38243	211 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	SPL2	P38839	148 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	TMN3	P40071	706 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	FTR1	P40088	404 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	PRM2	P40534	656 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	FDC1	Q03034	503 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	IRC4	Q03036	179 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	HLR1	Q04429	423 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	RKI1	Q12189	258 aa		4.9	□□□□□ -1.63
CPR1	YDR155C	TUP1	P16649	713 aa		4.89	□□□□□ -1.63
CPR1	YDR155C	ATP12	P22135	325 aa		4.89	□□□□□ -1.63
CPR1	YDR155C	MTC7	P32633	139 aa		4.89	□□□□□ -1.63
CPR1	YDR155C	ELF1	P36053	145 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms