RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C AHA1Q12449 350 aaKnown RBP2.05□□□□□ -2.08
SSS1YDR086C NOP14Q99207 810 aaKnown RBP2.05□□□□□ -2.08
SSS1YDR086C YEL076C-AP0CX16 216 aa2.04□□□□□ -2.08
SSS1YDR086C YLR464WP0CX17 216 aa2.04□□□□□ -2.08
SSS1YDR086C CDC26P14724 124 aa2.04□□□□□ -2.08
SSS1YDR086C BET2P20133 325 aa2.04□□□□□ -2.08
SSS1YDR086C AEP2P22136 580 aa2.04□□□□□ -2.08
SSS1YDR086C AIM17P23180 465 aaKnown RBP2.04□□□□□ -2.08
SSS1YDR086C YCP4P25349 247 aaKnown RBP2.04□□□□□ -2.08
SSS1YDR086C MTG2P38860 518 aa2.04□□□□□ -2.08
SSS1YDR086C YEL076CP39971 216 aa2.04□□□□□ -2.08
SSS1YDR086C LAS21P40367 830 aa2.04□□□□□ -2.08
SSS1YDR086C VID28P40547 921 aa2.04□□□□□ -2.08
SSS1YDR086C PEF1P53238 335 aa2.04□□□□□ -2.08
SSS1YDR086C ECM9Q02202 377 aa2.04□□□□□ -2.08
SSS1YDR086C UTP14Q04500 899 aaKnown RBP2.04□□□□□ -2.08
SSS1YDR086C GRS2Q06817 618 aa2.04□□□□□ -2.08
SSS1YDR086C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SSS1YDR086C YTM1Q12024 460 aaPredicted RBP2.04□□□□□ -2.08
SSS1YDR086C ILS1P09436 1072 aaKnown RBP2.03□□□□□ -2.08
SSS1YDR086C PCK1P10963 549 aa2.03□□□□□ -2.08
SSS1YDR086C DGR2P32330 852 aa2.03□□□□□ -2.08
SSS1YDR086C CDC5P32562 705 aa2.03□□□□□ -2.08
SSS1YDR086C DSS4P32601 143 aa2.03□□□□□ -2.08
SSS1YDR086C TYS1P36421 394 aaKnown RBP2.03□□□□□ -2.08
SSS1YDR086C FAT1P38225 669 aa2.03□□□□□ -2.08
SSS1YDR086C FTH1P38310 465 aa2.03□□□□□ -2.08
SSS1YDR086C RTT107P38850 1070 aa2.03□□□□□ -2.08
SSS1YDR086C MAF1P41910 395 aa2.03□□□□□ -2.08
SSS1YDR086C MNN11P46985 422 aaKnown RBP2.03□□□□□ -2.08
SSS1YDR086C ALG12P53730 551 aa2.03□□□□□ -2.08
SSS1YDR086C SQS1P53866 767 aaKnown RBP2.03□□□□□ -2.08
SSS1YDR086C RPL15BP54780 204 aaPredicted RBP2.03□□□□□ -2.08
SSS1YDR086C AAT1Q01802 451 aa2.03□□□□□ -2.08
SSS1YDR086C CYK3Q07533 885 aa2.03□□□□□ -2.08
SSS1YDR086C ATX2Q12067 313 aa2.03□□□□□ -2.08
SSS1YDR086C UBX3Q12229 455 aa2.03□□□□□ -2.08
SSS1YDR086C PNO1Q99216 274 aaKnown RBP2.03□□□□□ -2.08
SSS1YDR086C YTA7P40340 1379 aa2.02□□□□□ -2.09
SSS1YDR086C ADR1P07248 1323 aa2.02□□□□□ -2.09
SSS1YDR086C YPT1P01123 206 aaKnown RBP2.02□□□□□ -2.09
SSS1YDR086C RPS21AP0C0V8 87 aaKnown RBP2.02□□□□□ -2.09
SSS1YDR086C YPK1P12688 680 aaKnown RBP2.02□□□□□ -2.09
SSS1YDR086C MAK32P23060 363 aa2.02□□□□□ -2.09
SSS1YDR086C PPG1P32838 368 aa2.02□□□□□ -2.09
SSS1YDR086C NOP2P40991 618 aaKnown RBP2.02□□□□□ -2.09
SSS1YDR086C HLJ1P48353 224 aa2.02□□□□□ -2.09
SSS1YDR086C LYS20P48570 428 aaKnown RBP2.02□□□□□ -2.09
SSS1YDR086C COG2P53271 262 aa2.02□□□□□ -2.09
SSS1YDR086C GIS2P53849 153 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SSS1YDR086C MTQ2Q03920 221 aaPredicted RBP2.02□□□□□ -2.09
SSS1YDR086C SNA4Q07549 140 aa2.02□□□□□ -2.09
SSS1YDR086C THI73Q07904 523 aa2.02□□□□□ -2.09
SSS1YDR086C CHO2P05374 869 aaKnown RBP2.01□□□□□ -2.09
SSS1YDR086C PLC1P32383 869 aa2.01□□□□□ -2.09
SSS1YDR086C SDH8P38345 138 aa2.01□□□□□ -2.09
SSS1YDR086C SRP68P38687 599 aaKnown RBP2.01□□□□□ -2.09
SSS1YDR086C FLO5P38894 1075 aa2.01□□□□□ -2.09
SSS1YDR086C MNN1P39106 762 aa2.01□□□□□ -2.09
SSS1YDR086C MAM1P40065 302 aa2.01□□□□□ -2.09
SSS1YDR086C YIR016WP40572 265 aa2.01□□□□□ -2.09
SSS1YDR086C PMT3P47190 753 aa2.01□□□□□ -2.09
SSS1YDR086C YNL092WP53934 400 aa2.01□□□□□ -2.09
SSS1YDR086C SNU56Q03782 492 aaKnown RBP2.01□□□□□ -2.09
SSS1YDR086C RAD33Q04231 177 aa2.01□□□□□ -2.09
SSS1YDR086C SCW10Q04951 389 aa2.01□□□□□ -2.09
SSS1YDR086C NDD1Q08887 554 aa2.01□□□□□ -2.09
SSS1YDR086C GET3Q12154 354 aaKnown RBP2.01□□□□□ -2.09
SSS1YDR086C PHO2P07269 559 aa2□□□□□ -2.09
SSS1YDR086C CWH43P25618 953 aa2□□□□□ -2.09
SSS1YDR086C RPT3P33298 428 aaKnown RBP2□□□□□ -2.09
SSS1YDR086C KES1P35844 434 aaKnown RBP2□□□□□ -2.09
SSS1YDR086C RMA1P36001 430 aaKnown RBP2□□□□□ -2.09
SSS1YDR086C YIL152WP40455 235 aa2□□□□□ -2.09
SSS1YDR086C CIN1P40987 1014 aa2□□□□□ -2.09
SSS1YDR086C RNR4P49723 345 aaKnown RBP2□□□□□ -2.09
SSS1YDR086C RNH70P53331 553 aa2□□□□□ -2.09
SSS1YDR086C DNM1P54861 757 aa2□□□□□ -2.09
SSS1YDR086C YLR281CQ05863 155 aa2□□□□□ -2.09
SSS1YDR086C DSE3Q08729 430 aa2□□□□□ -2.09
SSS1YDR086C LYS21Q12122 440 aaKnown RBP2□□□□□ -2.09
SSS1YDR086C NOP56Q12460 504 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SSS1YDR086C VPS5Q92331 675 aa2□□□□□ -2.09
SSS1YDR086C KGD2P19262 463 aaPredicted RBP1.99□□□□□ -2.09
SSS1YDR086C HXT4P32467 576 aa1.99□□□□□ -2.09
SSS1YDR086C GDA1P32621 518 aa1.99□□□□□ -2.09
SSS1YDR086C IMD2P38697 523 aaKnown RBP1.99□□□□□ -2.09
SSS1YDR086C IMD3P50095 523 aaKnown RBP1.99□□□□□ -2.09
SSS1YDR086C UME1Q03010 460 aa1.99□□□□□ -2.09
SSS1YDR086C YTH1Q06102 208 aaPredicted RBP1.99□□□□□ -2.09
SSS1YDR086C NUP145P49687 1317 aa1.98□□□□□ -2.09
SSS1YDR086C YCR043CP25361 127 aa1.98□□□□□ -2.09
SSS1YDR086C PRP45P28004 379 aaPredicted RBP1.98□□□□□ -2.09
SSS1YDR086C SCO2P38072 301 aa1.98□□□□□ -2.09
SSS1YDR086C MDR1P53258 950 aa1.98□□□□□ -2.09
SSS1YDR086C MLH2Q07980 695 aa1.98□□□□□ -2.09
SSS1YDR086C NGL1Q08213 363 aaKnown RBP1.98□□□□□ -2.09
SSS1YDR086C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SSS1YDR086C LCB4Q12246 624 aa1.98□□□□□ -2.09
SSS1YDR086C NOP1P15646 327 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms