RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	WHI3	P34761	661 aa	Known RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	RMA1	P36001	430 aa	Known RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	UBP7	P40453	1071 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	ARC1	P46672	376 aa	Known RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	TEL2	P53038	688 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	VPS75	P53853	264 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	YSA1	Q01976	231 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	SGO1	Q08490	590 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	RTN2	Q12443	393 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	YOR111W	Q99210	232 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	MYO4	P32492	1471 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	YLR302C	O13544	120 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	CDC24	P11433	854 aa	Predicted RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	HMG2	P12684	1045 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	PRP22	P24384	1145 aa	Known RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	SFA1	P32771	386 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	GSM1	P42950	618 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	POL31	P46957	487 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	TAH11	P47112	604 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	PRP31	P49704	494 aa	Predicted RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	VBA4	Q04602	768 aa	Known RBP	5.63	□□□□□ -1.51
LCB2	YDR062W	GAS5	Q08193	484 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	YBR126W-A	Q8TGU7	68 aa		5.63	□□□□□ -1.51
LCB2	YDR062W	SPE1	P08432	466 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	PMS1	P14242	873 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	AAD3	P25612	363 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	MAC1	P35192	417 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	ATG19	P35193	415 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	RXT2	P38255	430 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	YJL068C	P40363	299 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	CIT3	P43635	486 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	GPI8	P49018	411 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	ZDS2	P54786	942 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	ATG21	Q02887	496 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	RSM24	Q03976	319 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	MUS81	Q04149	632 aa	Predicted RBP	5.62	□□□□□ -1.51
LCB2	YDR062W	VPS36	Q06696	566 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	PGC1	Q08959	321 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	ISA2	Q12425	185 aa		5.62	□□□□□ -1.51
LCB2	YDR062W	ERG20	P08524	352 aa	Known RBP	5.61	□□□□□ -1.51
LCB2	YDR062W	SUI3	P09064	285 aa	Known RBP	5.61	□□□□□ -1.51
LCB2	YDR062W	ADE2	P21264	571 aa	Known RBP	5.61	□□□□□ -1.51
LCB2	YDR062W	PRE4	P30657	266 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	MRP20	P32387	263 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	SPO22	P40511	975 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	COG1	P53079	417 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	YNR061C	P53747	219 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	ARG5,6	Q01217	863 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	REC102	Q02721	264 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	RMT2	Q03305	412 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	YDR131C	Q03899	556 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	MCM21	Q06675	368 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	ADY3	Q07732	790 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	CIR2	Q08822	631 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	SNT2	P53127	1403 aa		5.61	□□□□□ -1.51
LCB2	YDR062W	TUB2	P02557	457 aa	Known RBP	5.6	□□□□□ -1.51
LCB2	YDR062W	LCB1	P25045	558 aa	Known RBP	5.6	□□□□□ -1.51
LCB2	YDR062W	RSC6	P25632	483 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	YPT7	P32939	208 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	FMP10	P40098	244 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	IST3	P40565	148 aa	Predicted RBP	5.6	□□□□□ -1.51
LCB2	YDR062W	MRX6	P48564	524 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	ASI2	P53895	289 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	VPS9	P54787	451 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	ARP9	Q05123	467 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	ADY4	Q05955	493 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
LCB2	YDR062W	CTI6	Q08923	506 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	DNF2	Q12675	1612 aa		5.6	□□□□□ -1.51
LCB2	YDR062W	RPB2	P08518	1224 aa	Known RBP	5.59	□□□□□ -1.51
LCB2	YDR062W	OCA4	P25366	362 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	PEX7	P39108	375 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	ACO2	P39533	789 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	YNL195C	P40168	261 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	YIL166C	P40445	542 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	BIT61	P47041	543 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	DSD1	P53095	428 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	TRS31	Q03337	283 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	VPS64	Q03944	604 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	HMO1	Q03973	246 aa	Known RBP	5.59	□□□□□ -1.51
LCB2	YDR062W	RCO1	Q04779	684 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	ICL2	Q12031	575 aa		5.59	□□□□□ -1.51
LCB2	YDR062W	YCK2	P23292	546 aa	Known RBP	5.59	□□□□□ -1.52
LCB2	YDR062W	APT2	P36973	181 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	FLC2	P39719	783 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	VFA1	P40080	203 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	COX18	P53239	316 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	SPO1	P53541	631 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	RCM1	P53972	490 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	YDR444W	Q04093	687 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	ENT4	Q07872	247 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	TRE1	Q08919	783 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	YPL191C	Q08930	360 aa		5.59	□□□□□ -1.52
LCB2	YDR062W	NUP170	P38181	1502 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	TY2A-LR1	P0C2J4	438 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	TY2A-F	P0CX61	438 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	TY2A-GR2	P0CX62	438 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	PRE8	P23639	250 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	TY2A-C	P25383	438 aa		5.58	□□□□□ -1.52
LCB2	YDR062W	RPS7A	P26786	190 aa	Known RBP	5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms