RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	SWI4	P25302	1093 aa	Known RBP	4.91	□□□□□ -1.62
MSS2	YDL107W	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	ARG2	P40360	574 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	VPS73	P53142	486 aa	Known RBP	4.91	□□□□□ -1.62
MSS2	YDL107W	ARC35	P53731	342 aa	Known RBP	4.91	□□□□□ -1.62
MSS2	YDL107W	TMA64	Q04600	565 aa	Known RBP	4.91	□□□□□ -1.62
MSS2	YDL107W	ENT2	Q05785	613 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	ARR3	Q06598	404 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	IZH3	Q07959	543 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	SSP2	Q08646	371 aa		4.91	□□□□□ -1.62
MSS2	YDL107W	NCP1	P16603	691 aa	Known RBP	4.9	□□□□□ -1.63
MSS2	YDL107W	RIT1	P23796	513 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	DSS4	P32601	143 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	XRS2	P33301	854 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	ELF1	P36053	145 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	GLG1	P36143	616 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	MRPL36	P36531	177 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	CAB2	P40506	365 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	YGR151C	P53287	111 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	VPS64	Q03944	604 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	YMR018W	Q04364	514 aa		4.9	□□□□□ -1.63
MSS2	YDL107W	EIS1	Q05050	843 aa	Known RBP	4.9	□□□□□ -1.63
MSS2	YDL107W	GFD2	P25370	566 aa	Known RBP	4.89	□□□□□ -1.63
MSS2	YDL107W	YCL049C	P25577	312 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	RPS7A	P26786	190 aa	Known RBP	4.89	□□□□□ -1.63
MSS2	YDL107W	DHR2	P36009	735 aa	Predicted RBP	4.89	□□□□□ -1.63
MSS2	YDL107W	RAD26	P40352	1085 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	POL31	P46957	487 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	NMA2	P53204	395 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	DIP5	P53388	608 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	ATG21	Q02887	496 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	TRS31	Q03337	283 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	HOF1	Q05080	669 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	YSH1	Q06224	779 aa	Predicted RBP	4.89	□□□□□ -1.63
MSS2	YDL107W	TAF3	Q12297	353 aa		4.89	□□□□□ -1.63
MSS2	YDL107W	BET2	P20133	325 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	RER1	P25560	188 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	FRD1	P32614	470 aa	Known RBP	4.88	□□□□□ -1.63
MSS2	YDL107W	SLC1	P33333	303 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	APL3	P38065	1025 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	YBR138C	P38277	524 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	KSP1	P38691	1029 aa	Known RBP	4.88	□□□□□ -1.63
MSS2	YDL107W	IDS2	P46958	469 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	EFR3	Q03653	782 aa	Known RBP	4.88	□□□□□ -1.63
MSS2	YDL107W	ICL2	Q12031	575 aa		4.88	□□□□□ -1.63
MSS2	YDL107W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
MSS2	YDL107W	UBC1	P21734	215 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	CAP1	P28495	268 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	PRE2	P30656	287 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	MCM10	P32354	571 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	ARP2	P32381	391 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	RRN3	P36070	627 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	MRPL7	P36519	292 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	UME6	P39001	836 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	KAP123	P40069	1113 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	COS12	P53053	380 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	MFM1	Q02783	413 aa		4.87	□□□□□ -1.63
MSS2	YDL107W	NEW1	Q08972	1196 aa	Known RBP	4.87	□□□□□ -1.63
MSS2	YDL107W	MTF2	P10849	440 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	EMP70	P32802	667 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	NPR3	P38742	1146 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	ERP2	P39704	215 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	THI6	P41835	540 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	OPY2	Q06810	360 aa		4.86	□□□□□ -1.63
MSS2	YDL107W	SNF1	P06782	633 aa	Known RBP	4.85	□□□□□ -1.63
MSS2	YDL107W	DMC1	P25453	334 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	RAD16	P31244	790 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	RPT3	P33298	428 aa	Known RBP	4.85	□□□□□ -1.63
MSS2	YDL107W	GMH1	P36125	273 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	IFA38	P38286	347 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	FSH1	P38777	243 aa	Known RBP	4.85	□□□□□ -1.63
MSS2	YDL107W	BDH2	P39713	417 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	SAP4	P53036	818 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	IMA1	P53051	589 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	UFO1	Q04511	668 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	RKI1	Q12189	258 aa		4.85	□□□□□ -1.63
MSS2	YDL107W	LAM4	P38800	1345 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	LEU2	P04173	364 aa	Predicted RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	PRP45	P28004	379 aa	Predicted RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	CHS3	P29465	1165 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	ARB1	P40024	610 aa	Known RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	BNA1	P47096	177 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	SPC98	P53540	846 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	DAK1	P54838	584 aa	Known RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	YPL108W	Q02872	168 aa	Predicted RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	YML122C	Q03207	126 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	COG4	Q06096	861 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	CSR1	Q06705	408 aa	Known RBP	4.84	□□□□□ -1.63
MSS2	YDL107W	AIM6	Q07716	390 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	YPL216W	Q08964	1102 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	TRM8	Q12009	286 aa		4.84	□□□□□ -1.63
MSS2	YDL107W	RPA135	P22138	1203 aa	Known RBP	4.83	□□□□□ -1.64
MSS2	YDL107W	VPS34	P22543	875 aa		4.83	□□□□□ -1.64
MSS2	YDL107W	SWC3	P31376	625 aa		4.83	□□□□□ -1.64
MSS2	YDL107W	GCD7	P32502	381 aa	Predicted RBP	4.83	□□□□□ -1.64
MSS2	YDL107W	PPZ2	P33329	710 aa		4.83	□□□□□ -1.64
MSS2	YDL107W	MEP3	P53390	489 aa		4.83	□□□□□ -1.64
MSS2	YDL107W	SNF12	P53628	566 aa		4.83	□□□□□ -1.64
MSS2	YDL107W	ESF2	P53743	316 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms