RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W YOR342CQ12182 319 aa6.75□□□□□ -1.33
BDF2YDL070W TEF1P02994 458 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W SNF4P12904 322 aa6.74□□□□□ -1.33
BDF2YDL070W SRM1P21827 482 aa6.74□□□□□ -1.33
BDF2YDL070W MAC1P35192 417 aa6.74□□□□□ -1.33
BDF2YDL070W MAE1P36013 669 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W TBS1P38114 1094 aa6.74□□□□□ -1.33
BDF2YDL070W CTP1P38152 299 aa6.74□□□□□ -1.33
BDF2YDL070W MUM2P38236 366 aa6.74□□□□□ -1.33
BDF2YDL070W SSZ1P38788 538 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W PIK1P39104 1066 aa6.74□□□□□ -1.33
BDF2YDL070W PEP8P40335 379 aa6.74□□□□□ -1.33
BDF2YDL070W ALY2P47029 1046 aa6.74□□□□□ -1.33
BDF2YDL070W YGR117CP53270 476 aa6.74□□□□□ -1.33
BDF2YDL070W SLU7Q02775 382 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W RNY1Q02933 434 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W AAD15Q08361 143 aa6.74□□□□□ -1.33
BDF2YDL070W SAM3Q08986 587 aa6.74□□□□□ -1.33
BDF2YDL070W GSC2P40989 1895 aa6.74□□□□□ -1.33
BDF2YDL070W MCM1P11746 286 aa6.74□□□□□ -1.33
BDF2YDL070W PRE8P23639 250 aa6.74□□□□□ -1.33
BDF2YDL070W CCR4P31384 837 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W GDA1P32621 518 aa6.74□□□□□ -1.33
BDF2YDL070W HBS1P32769 611 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W PEX5P35056 612 aa6.74□□□□□ -1.33
BDF2YDL070W KAP104P38217 918 aaKnown RBP6.74□□□□□ -1.33
BDF2YDL070W YBR285WP38354 144 aa6.74□□□□□ -1.33
BDF2YDL070W BSD2P38356 321 aa6.74□□□□□ -1.33
BDF2YDL070W IES5P40060 125 aa6.74□□□□□ -1.33
BDF2YDL070W HPM1P40481 377 aa6.74□□□□□ -1.33
BDF2YDL070W YJR054WP47114 497 aa6.74□□□□□ -1.33
BDF2YDL070W MRK1P50873 501 aa6.74□□□□□ -1.33
BDF2YDL070W RMR1P53060 241 aa6.74□□□□□ -1.33
BDF2YDL070W LSB1P53281 241 aa6.74□□□□□ -1.33
BDF2YDL070W ARK1P53974 638 aa6.74□□□□□ -1.33
BDF2YDL070W TVP15Q03860 143 aa6.74□□□□□ -1.33
BDF2YDL070W CRF1Q04930 467 aa6.74□□□□□ -1.33
BDF2YDL070W FAR10Q06001 478 aa6.74□□□□□ -1.33
BDF2YDL070W PSR1Q07800 427 aa6.74□□□□□ -1.33
BDF2YDL070W PSF3Q12146 194 aa6.74□□□□□ -1.33
BDF2YDL070W EMP46Q12396 444 aa6.74□□□□□ -1.33
BDF2YDL070W RPN13O13563 156 aa6.73□□□□□ -1.33
BDF2YDL070W MF(ALPHA)1P01149 165 aa6.73□□□□□ -1.33
BDF2YDL070W HSP60P19882 572 aaKnown RBP6.73□□□□□ -1.33
BDF2YDL070W GBP2P25555 427 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
BDF2YDL070W CDC20P26309 610 aa6.73□□□□□ -1.33
BDF2YDL070W PTP2P29461 750 aa6.73□□□□□ -1.33
BDF2YDL070W RIM2P38127 377 aa6.73□□□□□ -1.33
BDF2YDL070W YHR112CP38716 378 aa6.73□□□□□ -1.33
BDF2YDL070W GOS1P38736 223 aa6.73□□□□□ -1.33
BDF2YDL070W PAN5P38787 379 aa6.73□□□□□ -1.33
BDF2YDL070W RPN3P40016 523 aaKnown RBP6.73□□□□□ -1.33
BDF2YDL070W TMN3P40071 706 aa6.73□□□□□ -1.33
BDF2YDL070W TRF5P48561 642 aaKnown RBP6.73□□□□□ -1.33
BDF2YDL070W PSP2P50109 593 aaKnown RBP6.73□□□□□ -1.33
BDF2YDL070W YNL115CP53925 644 aa6.73□□□□□ -1.33
BDF2YDL070W YNL058CP53947 316 aa6.73□□□□□ -1.33
BDF2YDL070W TLG1Q03322 224 aa6.73□□□□□ -1.33
BDF2YDL070W WRS1Q12109 432 aaKnown RBP6.73□□□□□ -1.33
BDF2YDL070W HPR1P17629 752 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W SAM2P19358 384 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W FAR1P21268 830 aa6.72□□□□□ -1.33
BDF2YDL070W HEM12P32347 362 aaPredicted RBP6.72□□□□□ -1.33
BDF2YDL070W UGP1P32861 499 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W YBR139WP38109 508 aa6.72□□□□□ -1.33
BDF2YDL070W APM2P38700 605 aa6.72□□□□□ -1.33
BDF2YDL070W NDT80P38830 627 aa6.72□□□□□ -1.33
BDF2YDL070W SEO1P39709 593 aa6.72□□□□□ -1.33
BDF2YDL070W DLD3P39976 496 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W MSS2P40990 351 aa6.72□□□□□ -1.33
BDF2YDL070W PHO86P46956 311 aa6.72□□□□□ -1.33
BDF2YDL070W YJL045WP47052 634 aa6.72□□□□□ -1.33
BDF2YDL070W ORC5P50874 479 aa6.72□□□□□ -1.33
BDF2YDL070W COP1P53622 1201 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W ORC4P54791 529 aa6.72□□□□□ -1.33
BDF2YDL070W THI20Q08224 551 aa6.72□□□□□ -1.33
BDF2YDL070W SOG2Q08817 791 aa6.72□□□□□ -1.33
BDF2YDL070W RSA1Q08932 381 aa6.72□□□□□ -1.33
BDF2YDL070W SRD1P09007 221 aa6.72□□□□□ -1.33
BDF2YDL070W YCR016WP25617 290 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W ACH1P32316 526 aa6.72□□□□□ -1.33
BDF2YDL070W ABD1P32783 436 aaPredicted RBP6.72□□□□□ -1.33
BDF2YDL070W MDJ1P35191 511 aa6.72□□□□□ -1.33
BDF2YDL070W CSG2P35206 410 aa6.72□□□□□ -1.33
BDF2YDL070W MRX3P38172 270 aa6.72□□□□□ -1.33
BDF2YDL070W SHU2P38957 223 aa6.72□□□□□ -1.33
BDF2YDL070W MPT5P39016 859 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33 RIP-Chip
BDF2YDL070W IRC6P43615 237 aa6.72□□□□□ -1.33
BDF2YDL070W HLJ1P48353 224 aa6.72□□□□□ -1.33
BDF2YDL070W PSP1P50896 841 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W CEF1Q03654 590 aaPredicted RBP6.72□□□□□ -1.33
BDF2YDL070W YOR059CQ08448 450 aaKnown RBP6.72□□□□□ -1.33
BDF2YDL070W MNL2Q12205 849 aa6.72□□□□□ -1.33
BDF2YDL070W PSY3Q12318 242 aa6.72□□□□□ -1.33
BDF2YDL070W AI5_ALPHAQ9ZZX1 630 aa6.72□□□□□ -1.33
BDF2YDL070W BI2P03873 423 aa6.71□□□□□ -1.34
BDF2YDL070W BI4P03879 638 aa6.71□□□□□ -1.34
BDF2YDL070W VPS21P36017 210 aaKnown RBP6.71□□□□□ -1.34
BDF2YDL070W PHO89P38361 574 aa6.71□□□□□ -1.34
BDF2YDL070W FCY21P40039 528 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 106.7 ms