RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W KGD2P19262 463 aaPredicted RBP5.93□□□□□ -1.46
SHM1YBR263W PEX1P24004 1043 aa5.93□□□□□ -1.46
SHM1YBR263W PGS1P25578 521 aa5.93□□□□□ -1.46
SHM1YBR263W LRE1P25579 583 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W SYN8P31377 255 aa5.93□□□□□ -1.46
SHM1YBR263W MFT1P33441 392 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W YBR056WP38081 501 aa5.93□□□□□ -1.46
SHM1YBR263W CBR1P38626 284 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W QNS1P38795 714 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W EFM4P40516 257 aa5.93□□□□□ -1.46
SHM1YBR263W TAF1P46677 1066 aa5.93□□□□□ -1.46
SHM1YBR263W HOP2P53187 214 aa5.93□□□□□ -1.46
SHM1YBR263W YGR021WP53212 290 aa5.93□□□□□ -1.46
SHM1YBR263W PRM6Q04705 352 aa5.93□□□□□ -1.46
SHM1YBR263W SOV1Q04748 898 aa5.93□□□□□ -1.46
SHM1YBR263W YLR001CQ07895 862 aa5.93□□□□□ -1.46
SHM1YBR263W DIS3Q08162 1001 aaKnown RBP5.93□□□□□ -1.46
SHM1YBR263W YOR223WQ12015 292 aa5.93□□□□□ -1.46
SHM1YBR263W TAF10Q12030 206 aa5.93□□□□□ -1.46
SHM1YBR263W DAS2Q12084 232 aa5.93□□□□□ -1.46
SHM1YBR263W JIP3O13555 125 aa5.92□□□□□ -1.46
SHM1YBR263W VMA4P22203 233 aaKnown RBP5.92□□□□□ -1.46
SHM1YBR263W MET4P32389 672 aa5.92□□□□□ -1.46
SHM1YBR263W HXT1P32465 570 aa5.92□□□□□ -1.46
SHM1YBR263W STO1P34160 861 aaKnown RBP5.92□□□□□ -1.46
SHM1YBR263W LRG1P35688 1017 aa5.92□□□□□ -1.46
SHM1YBR263W ABZ1P37254 787 aaPredicted RBP5.92□□□□□ -1.46
SHM1YBR263W RPT2P40327 437 aaKnown RBP5.92□□□□□ -1.46
SHM1YBR263W SEC9P40357 651 aa5.92□□□□□ -1.46
SHM1YBR263W YGR111WP53265 400 aa5.92□□□□□ -1.46
SHM1YBR263W ARO80Q04052 950 aa5.92□□□□□ -1.46
SHM1YBR263W YLR257WQ06146 321 aaKnown RBP5.92□□□□□ -1.46
SHM1YBR263W YOR059CQ08448 450 aaKnown RBP5.92□□□□□ -1.46
SHM1YBR263W EMP46Q12396 444 aa5.92□□□□□ -1.46
SHM1YBR263W SPE1P08432 466 aa5.91□□□□□ -1.46
SHM1YBR263W RNQ1P25367 405 aa5.91□□□□□ -1.46
SHM1YBR263W TDA3P38758 523 aa5.91□□□□□ -1.46
SHM1YBR263W PFD1P46988 109 aa5.91□□□□□ -1.46
SHM1YBR263W GYL1Q04322 720 aa5.91□□□□□ -1.46
SHM1YBR263W RCL1Q08096 367 aaPredicted RBP5.91□□□□□ -1.46
SHM1YBR263W MDM38Q08179 573 aa5.91□□□□□ -1.46
SHM1YBR263W KAR3P17119 729 aa5.9□□□□□ -1.46
SHM1YBR263W SEG2P34250 1132 aa5.9□□□□□ -1.46
SHM1YBR263W BLI1P35727 113 aa5.9□□□□□ -1.46
SHM1YBR263W RGD1P38339 666 aa5.9□□□□□ -1.46
SHM1YBR263W TCD1P38756 429 aa5.9□□□□□ -1.46
SHM1YBR263W FHL1P39521 936 aa5.9□□□□□ -1.46
SHM1YBR263W ASG1P40467 964 aa5.9□□□□□ -1.46
SHM1YBR263W SNZ3P43545 298 aa5.9□□□□□ -1.46
SHM1YBR263W STU2P46675 888 aa5.9□□□□□ -1.46
SHM1YBR263W YJL045WP47052 634 aa5.9□□□□□ -1.46
SHM1YBR263W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
SHM1YBR263W VPS25P47142 202 aa5.9□□□□□ -1.46
SHM1YBR263W SNZ2P53824 298 aa5.9□□□□□ -1.46
SHM1YBR263W CEG1Q01159 459 aaPredicted RBP5.9□□□□□ -1.46
SHM1YBR263W DIG1Q03063 452 aaKnown RBP5.9□□□□□ -1.46
SHM1YBR263W HER2Q03557 464 aa5.9□□□□□ -1.46
SHM1YBR263W YMR018WQ04364 514 aa5.9□□□□□ -1.46
SHM1YBR263W YDR278CQ05612 105 aa5.9□□□□□ -1.46
SHM1YBR263W PIG1Q06216 648 aa5.9□□□□□ -1.46
SHM1YBR263W DDC1Q08949 612 aa5.9□□□□□ -1.46
SHM1YBR263W NBP2Q12163 236 aa5.9□□□□□ -1.46
SHM1YBR263W PDE1P22434 369 aa5.9□□□□□ -1.47
SHM1YBR263W TSA1P34760 196 aaKnown RBP5.9□□□□□ -1.47
SHM1YBR263W YHR131CP38835 850 aa5.9□□□□□ -1.47
SHM1YBR263W CDC1P40986 491 aa5.9□□□□□ -1.47
SHM1YBR263W GUF1P46943 645 aa5.9□□□□□ -1.47
SHM1YBR263W BFA1P47113 574 aa5.9□□□□□ -1.47
SHM1YBR263W BTN2P53286 410 aa5.9□□□□□ -1.47
SHM1YBR263W BOP3P53958 396 aa5.9□□□□□ -1.47
SHM1YBR263W NGL3Q03210 505 aa5.9□□□□□ -1.47
SHM1YBR263W TAF9Q05027 157 aa5.9□□□□□ -1.47
SHM1YBR263W ADE3P07245 946 aaKnown RBP5.89□□□□□ -1.47
SHM1YBR263W PUT4P15380 627 aa5.89□□□□□ -1.47
SHM1YBR263W AEP2P22136 580 aa5.89□□□□□ -1.47
SHM1YBR263W DSS4P32601 143 aa5.89□□□□□ -1.47
SHM1YBR263W SRB2P34162 210 aa5.89□□□□□ -1.47
SHM1YBR263W YKR051WP36142 418 aa5.89□□□□□ -1.47
SHM1YBR263W YBR053CP38235 358 aa5.89□□□□□ -1.47
SHM1YBR263W HIS2P38635 335 aa5.89□□□□□ -1.47
SHM1YBR263W TMN3P40071 706 aa5.89□□□□□ -1.47
SHM1YBR263W YER189WP40104 122 aa5.89□□□□□ -1.47
SHM1YBR263W OYE3P41816 400 aaPredicted RBP5.89□□□□□ -1.47
SHM1YBR263W APT1P49435 187 aaKnown RBP5.89□□□□□ -1.47
SHM1YBR263W KAP114P53067 1004 aa5.89□□□□□ -1.47
SHM1YBR263W JJJ1P53863 590 aa5.89□□□□□ -1.47
SHM1YBR263W ERV41Q04651 352 aa5.89□□□□□ -1.47
SHM1YBR263W HRD3Q05787 833 aa5.89□□□□□ -1.47
SHM1YBR263W ECM22Q05958 814 aaPredicted RBP5.89□□□□□ -1.47
SHM1YBR263W AIM39Q08223 395 aa5.89□□□□□ -1.47
SHM1YBR263W HMG2P12684 1045 aa5.88□□□□□ -1.47
SHM1YBR263W APE1P14904 514 aa5.88□□□□□ -1.47
SHM1YBR263W PET123P17558 318 aa5.88□□□□□ -1.47
SHM1YBR263W CKI1P20485 582 aa5.88□□□□□ -1.47
SHM1YBR263W RAD16P31244 790 aa5.88□□□□□ -1.47
SHM1YBR263W DBF4P32325 704 aa5.88□□□□□ -1.47
SHM1YBR263W ABD1P32783 436 aaPredicted RBP5.88□□□□□ -1.47
SHM1YBR263W POL12P38121 705 aaPredicted RBP5.88□□□□□ -1.47
SHM1YBR263W YBR225WP38321 900 aa5.88□□□□□ -1.47
SHM1YBR263W RRT2P38332 387 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms