RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	RRN7	P40992	514 aa		11.97	□□□□□ -0.49
PCH2	YBR186W	YRB1	P41920	201 aa	Known RBP	11.97	□□□□□ -0.49
PCH2	YBR186W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.97	□□□□□ -0.49	not detected
PCH2	YBR186W	RFX1	P48743	811 aa		11.97	□□□□□ -0.49
PCH2	YBR186W	SKI8	Q02793	397 aa	Predicted RBP	11.97	□□□□□ -0.49
PCH2	YBR186W	DED1	P06634	604 aa	Known RBP	11.96	□□□□□ -0.5
PCH2	YBR186W	VMA2	P16140	517 aa	Known RBP	11.96	□□□□□ -0.5
PCH2	YBR186W	YGR054W	P53235	642 aa	Known RBP	11.96	□□□□□ -0.5
PCH2	YBR186W	YNL146W	P53906	100 aa		11.96	□□□□□ -0.5
PCH2	YBR186W	NMA111	P53920	997 aa		11.96	□□□□□ -0.5
PCH2	YBR186W	YDR090C	Q03193	310 aa		11.96	□□□□□ -0.5
PCH2	YBR186W	YRR1	Q12172	810 aa		11.96	□□□□□ -0.5
PCH2	YBR186W	RGS2	Q99188	309 aa		11.96	□□□□□ -0.5
PCH2	YBR186W	URA10	P30402	227 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	UTP11	P34247	250 aa	Predicted RBP	11.95	□□□□□ -0.5
PCH2	YBR186W	ACA1	P39970	489 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	UBP7	P40453	1071 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	YIL054W	P40524	105 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	IRR1	P40541	1150 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	CCT7	P42943	550 aa	Known RBP	11.95	□□□□□ -0.5
PCH2	YBR186W	VTC4	P47075	721 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	TRF5	P48561	642 aa	Known RBP	11.95	□□□□□ -0.5
PCH2	YBR186W	NAN1	Q02931	896 aa	Known RBP	11.95	□□□□□ -0.5
PCH2	YBR186W	SRL4	Q03085	281 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	RSM24	Q03976	319 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	RAD30	Q04049	632 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	APC9	Q12107	265 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	YLL056C	Q12177	298 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	NTO1	Q12311	748 aa		11.95	□□□□□ -0.5
PCH2	YBR186W	HSF1	P10961	833 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	RPS5	P26783	225 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	CCR4	P31384	837 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	MRP4	P32902	394 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	APN2	P38207	520 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	BZZ1	P38822	633 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	HPM1	P40481	377 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	INP51	P40559	946 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	ZAP1	P47043	880 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	EMC2	P47133	292 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	CUL3	P53202	744 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	TAF11	Q04226	346 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	COQ9	Q05779	260 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	FAR10	Q06001	478 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	DUS3	Q06053	668 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	EMP46	Q12396	444 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	PUT4	P15380	627 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	VAC17	P25591	423 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	KDX1	P36005	433 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	MCR1	P36060	302 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	UTP9	P38882	575 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	SEC31	P38968	1273 aa	Known RBP	11.94	□□□□□ -0.5
PCH2	YBR186W	ERP2	P39704	215 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	SMP3	Q04174	516 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	AIM39	Q08223	395 aa		11.94	□□□□□ -0.5
PCH2	YBR186W	CAR1	P00812	333 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	URE2	P23202	354 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	PHA2	P32452	334 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	RPN2	P32565	945 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	PEP12	P32854	288 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	SHP1	P34223	423 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	YFL012W	P43580	148 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	YGL036W	P53185	909 aa	Predicted RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	YNL108C	P53929	270 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	ELP3	Q02908	557 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	YDR239C	Q03780	787 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	YMR160W	Q03823	816 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	GRX3	Q03835	250 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	YMR226C	Q05016	267 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	SUB2	Q07478	446 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	RPN8	Q08723	338 aa	Known RBP	11.93	□□□□□ -0.5
PCH2	YBR186W	PCD1	Q12524	340 aa		11.93	□□□□□ -0.5
PCH2	YBR186W	RIF1	P29539	1916 aa		11.92	□□□□□ -0.5
PCH2	YBR186W	RPT5	P33297	434 aa	Known RBP	11.92	□□□□□ -0.5
PCH2	YBR186W	PCF11	P39081	626 aa	Predicted RBP	11.92	□□□□□ -0.5
PCH2	YBR186W	DSL1	P53847	754 aa		11.92	□□□□□ -0.5
PCH2	YBR186W	FMP42	Q04991	504 aa		11.92	□□□□□ -0.5
PCH2	YBR186W	ISA1	Q07821	250 aa	Predicted RBP	11.92	□□□□□ -0.5
PCH2	YBR186W	VCX1	Q99385	411 aa		11.92	□□□□□ -0.5
PCH2	YBR186W	YLR278C	Q05854	1341 aa		11.92	□□□□□ -0.5
PCH2	YBR186W	STE2	D6VTK4	431 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	COR1	P07256	457 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	HEM12	P32347	362 aa	Predicted RBP	11.91	□□□□□ -0.5
PCH2	YBR186W	MET4	P32389	672 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	RDH54	P38086	958 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	YBR138C	P38277	524 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	APE4	P38821	490 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	PIK1	P39104	1066 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	EAF5	P39995	279 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	ORM1	P53224	222 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	TFB3	Q03290	321 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	ENT4	Q07872	247 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	YOR342C	Q12182	319 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	LDB17	Q12342	491 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	YPR089W	O13585	888 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	GAL10	P04397	699 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	TSR4	P25040	408 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	RPC82	P32349	654 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	HXT3	P32466	567 aa	Known RBP	11.91	□□□□□ -0.5
PCH2	YBR186W	YBR259W	P38338	688 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	ETP1	P38748	585 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms